Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0058 |
Symbol | tbpA |
ID | 4898027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 68188 |
End bp | 69171 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640110634 |
Product | thiamine transporter substrate binding subunit |
Protein accession | YP_001041950 |
Protein GI | 126460836 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily [TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTTC CGATCGTTGC TTCCTGTGTT GCGCTGGCTG CGGGAACAGC CGCGGCCGAG ACGCCCGTGC TGACGGTGCT GACCTACGAC AGCTTCACCT CGGAATGGGG TCCTGGCCCC GCGGTCGAGA AAGCCTTCGA GGAGACCTGC GCCTGCGACC TGCGCTTCGT CGCCGCGGGT GACGGGGCGG CGCTTCTGGC GCGGCTCCAG CTCGAGGGCG CGCGGAGCGA GGCCGACGTG GTTCTGGGGC TCGACACGAA CCTCACGGCG GCGGCGGCCG CGACCGGCCT CTTCGCTCCG CACGGCGTGA GCACGCCGCT CGATCTGCCG GTGGCCTGGG AGGATCCGCT GTTCCTGCCC TTCGACTGGG GCTGGTTCGC CTTCGTCCAT GACCGCAGGA TGGAAGATGT GCCGGCCTCG TTCGAGGAGC TGGCAGCGTC GGACTCCAAG ATCGTCATCC AGGATCCGCG CAGCTCGACC CCGGGTCTGG GCCTTCTGAT GTGGGTGAAG GCGGCCTACG GCGACCGTGC GCCCGAGATC TGGGAGGGGC TCGCCGACAA TATCGTGACG GTGACGCCCG GCTGGTCCGA GGCCTACGGC CTCTTCATGG AGGGCGAGGC CGACATGGTG CTGAGCTACA CCACCTCGCC CGCCTACCAT CTGATCGCCG AGGAGGACGA TACCAAGACT GCGGCCGCCT TCCGCGAGGG GCACTATCTG CAGGTCGAGG TGGCGGGCAA GCTGGCCGCG ACCGACCAGC CGGAGCTGGC CGACCGCTTC ATGGCCTTCC TCCTGGAAGA GCCGGTGCAG TCGGTGCTGC CCACGACGAA CTGGATGTAT CCGGCGAAGC TGCCCGCCGC GGGCCTGCCC GAGGGGTTCG AGACGCTGGT GCAGCCCGAG ACCTCGCTTC TGCTATCGGC TGACGAGGCG CTCGCCCTCC GGCCCGAGGC TCTGGCCGAA TGGCAAGACG CGCTGGCGCG CTGA
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Protein sequence | MRLPIVASCV ALAAGTAAAE TPVLTVLTYD SFTSEWGPGP AVEKAFEETC ACDLRFVAAG DGAALLARLQ LEGARSEADV VLGLDTNLTA AAAATGLFAP HGVSTPLDLP VAWEDPLFLP FDWGWFAFVH DRRMEDVPAS FEELAASDSK IVIQDPRSST PGLGLLMWVK AAYGDRAPEI WEGLADNIVT VTPGWSEAYG LFMEGEADMV LSYTTSPAYH LIAEEDDTKT AAAFREGHYL QVEVAGKLAA TDQPELADRF MAFLLEEPVQ SVLPTTNWMY PAKLPAAGLP EGFETLVQPE TSLLLSADEA LALRPEALAE WQDALAR
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