| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0023 |
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| Symbol | |
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| ID | 4898084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 25192 |
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| End bp | 27216 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640110599 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001041915 |
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| Protein GI | 126460801 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGG CGCGGTGGCT GTTTGCGGCA GCGGCGGGGC TGTTCCTCGC CGCCGCCGCC
CGCGACGGGG GCGAGGGCTT CATCGCCGCG ACCGTGATGC CGCCGCTGGC GCTGCAGACC
TCGGTCGAGG TCGAGGCGCG CGACGGCACG CTCCTGCGCG CCTATACCGT CGCCGACGGC
CGCTGGCGGC TGGAGCCGGG GCCGGTCGAT CCGCTGTTCC TGAAGATGCT CGTGGCCTAC
GAGGACGGCC GTTTCTACGA CCATGGCGGC ATCGATCCGC TGGCGCTGAC GCGGGCGGTG
CTGCAGGCGC TGCGCTACGG GCAGGTGGTA TCGGGCGGCT CGACCCTCAC CATGCAGGTC
GCGCGGCTCC TCGAAGAAAG CGGCACCGGC CGGGTGGCGG GCAAGCTGCG CCAGATGCGG
GTGGCGCTGG CGCTCGAGCG GCGGCTTTCG AAGCAGGAGA TCCTGTCGCT CTACCTCCGT
CTGGCGCCCT ATGGCGGCAA CCTCGAGGGG ATCCGGGCGG CGTCGATCTC CTACCTCGGC
AAGGAGCCCG CCCGGCTGAC CGCGGCCGAG GCGGCGCTTC TGGTCGCCAT CCCGCAATCG
CCCGAAGGAC GGCGGCCCGA CCGCCACCCC GAGCGGGCCG AGGCCGCGCG GGCCCGCGTC
CTCGCCCGCG CCGTCCGGGC GGAGGTGATC GAGCCCGACC GCGCCGAGGC TGCCCTGCGG
GAGCCGGTGC CGCGGGCGCG CAAGCCCTTC CCCGCCGTGG CACCGCATCT GGCCGACCGG
GTGGCGAAGG CCGATCCGCT GCGCCAGACC CACCGGCTGA CCCTCGACGC AGCCCTGCAG
AAGCGGCTCG AGACGCTGGC TGCCGAGACG GTCGAGGCGC GGGGCGAGCG GCTTCAGGTG
GCGATGCTGG TGGCCGACCA CCGCTCGGGC GAGATCCTGG CCTCGGTCGG ATCGGCGGCC
TACCGGGCCG ACCGGCGGCA GGGCTTTCTC GACATGACGG TGGCGTTGCG CAGCCCGGGC
TCGCTCCTCA AGCCCCTGAT CTACGGGCTT GCCTTCGACG AGGGCCTCGC CCATCCCGAG
ACGCTGCTCG ACGACCGGCC GATGGATTTC GCGGGCTACC GGCCGCAGAA CTTCGACCGG
ATCTTCCGCG GCGAGATCCG CGCGCGCGAG GCGCTGCAGA TGTCGCTGAA CCTGCCTGCG
GTCGCGCTGA CCGATGCGCT GGGGCCCGCG CGGCTTCTGT CCGCGCTGGA GCAGGCGGGG
GTGAAGCCGG TGCTGCCGGG CGGGCAGCCG GGCCTCGCCG TGGCGCTGGG AGGCGTGGGC
GTCACGCTCT CCGACATGGT CCAACTCTAT GCCGCGCTCG CCCGTGGCGG GGTGGTGCTG
CCGCTCCATG TCGAGGGCGA GGGCGCGCCG GGGCGGCGGC TGATGTCCGA GGTTTCGGCC
TGGCAGGTGG CGGACATCCT GTCGGGCATG GCGCCGCCAC CCGGCGCGCC GGCGAACCGG
CTGGCCTACA AGACCGGCAC CAGCTACGGC CACCGCGACG CCTGGGCGGT GGGGTTCGAC
GGACAGCATG TGGTGGGGAT CTGGCTCGGG CGGGCCGACG GCACCCCGGT GCCGGGGGTC
TTCGGCGCCG ATCTCGCGGC GCCGGTGCTG TTCCGCGCCT TCGCCCGGCT GAAGCCCGCG
CTGGAGTCCT TGCCGCCCCC GCCTCGGGCG GCCCTGACGG TGAGCAATGC CGAGCTGCCG
CAGCCGCTCC GCCGATTCCG CTCCCGCCTC GCGGCCTTCC AGACCGTGGG CGGGCCGCAG
GTGGCCTTCC CGCCCGACGG GGCCGAGGTC GAGCGGCTGC GCGGCGGGCT GAAGGTGAAG
GTCGAGGGCG GGACGGCCCC CTTCACCTGG CTTGCGAACG GGGCTCCGGT CGCGGTCTCG
CTCGGCGGGC GCGAGACGCT GCTCGACCTG CCGGCGGGGT TCCTCACCCT TTCGGTGATC
GACGCGGACG GCCGCTCGGC CAGGACCGCG GTGCGACTGC GCTAG
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| Protein sequence | MIRARWLFAA AAGLFLAAAA RDGGEGFIAA TVMPPLALQT SVEVEARDGT LLRAYTVADG
RWRLEPGPVD PLFLKMLVAY EDGRFYDHGG IDPLALTRAV LQALRYGQVV SGGSTLTMQV
ARLLEESGTG RVAGKLRQMR VALALERRLS KQEILSLYLR LAPYGGNLEG IRAASISYLG
KEPARLTAAE AALLVAIPQS PEGRRPDRHP ERAEAARARV LARAVRAEVI EPDRAEAALR
EPVPRARKPF PAVAPHLADR VAKADPLRQT HRLTLDAALQ KRLETLAAET VEARGERLQV
AMLVADHRSG EILASVGSAA YRADRRQGFL DMTVALRSPG SLLKPLIYGL AFDEGLAHPE
TLLDDRPMDF AGYRPQNFDR IFRGEIRARE ALQMSLNLPA VALTDALGPA RLLSALEQAG
VKPVLPGGQP GLAVALGGVG VTLSDMVQLY AALARGGVVL PLHVEGEGAP GRRLMSEVSA
WQVADILSGM APPPGAPANR LAYKTGTSYG HRDAWAVGFD GQHVVGIWLG RADGTPVPGV
FGADLAAPVL FRAFARLKPA LESLPPPPRA ALTVSNAELP QPLRRFRSRL AAFQTVGGPQ
VAFPPDGAEV ERLRGGLKVK VEGGTAPFTW LANGAPVAVS LGGRETLLDL PAGFLTLSVI
DADGRSARTA VRLR
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