| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80013 |
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| Symbol | MIS1 |
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| ID | 4840824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | - |
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| Start bp | 59728 |
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| End bp | 63948 |
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| Gene Length | 4221 bp |
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| Protein Length | 995 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640392139 |
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| Product | mitochondrial C1- tetrahydrofolate synthase precursor |
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| Protein accession | XP_001386613 |
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| Protein GI | 150866874 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
[COG2759] Formyltetrahydrofolate synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.959666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTTCCGTTC TTGCTGAGAC TTCTAATCTG AACTACGTTA GCTTCAACTC CAGCGCCGTA
TCCGCTATTG CTAACATTCG TTCCCTTTGG ACCCTTATAG ACTCGATTTT TCAGATTTTG
CATCTAGCAA CTTGACCATA TAGCAACTTC ATAGACTTAT ACACATCTGG AAAATGTTGT
CGAAACACAT TTCCAAGCAA CTCATAAAAC CTGTCAGAGT GTCAAGACTC TCTGCAAGGA
CTTTTTCACT TTCTTCCCGC AATCTTGATG CTGTCGTACT TTCAGGAACG AAGTTGGCTA
AAACCATCAG AAATAATATC GCTGAAAAGG TTATCCACTA CAACCAGGCC CACTACGACG
AGTTTGCCAA TATCGACACC ATCGACTTCA CGGCACTTAA GTTCCGTCCA AACTTGACCA
TTATCCAAGT TGGTTCCAGA CCAGACTCGT CTGCTTATGT CCGTTCCAAG TTGAAGGCTG
CTCAGCTGTC CAATATTCAG TCAACACTTG TCAAACTTGA TGAAGACATT TCCCAAGAAG
ACTTGTTGGA AGAAATTGAC CGTTTGAACA AGAACCCCAA GGTAAACGGT TTGTTGATCC
AGTTGCCATT GCCAAAGCAC ATCGACGAGA CGTTAGTAAC AAACTCGGTT GCTACCGAAA
AAGATGTGGA TGGTTTCGAT CGTTACAACG TGGGAGAGCT CTCCAAACGT GGTGGTTCTC
CATTATTCCT CCCTTGTACA CCTAGTGGAA TTATAGAGCT CATAAAGACT ACTGGTGTCA
CTTTACGTGG TAAGAATGCT GTTGTTATCG GGCGTTCTGA TATCGTAGGT ACACCTGTTG
CTGCCTTGTT GAAGAACGAA GACTGTACCG TCACCACTTG TCATCGTTAC ACCAAGGACT
TGCCTGAAGT AGTGTCTAGA GCAGATATTG TTGTGGCTGC TGTCGGCATT CCTGAATATG
TCAAAGCCGA ATGGATCAAA TCTGATGCCA TTGTCATTGA CGTTGGTATC AATTATAAGG
AAGATTCTAC AGCAAAGAAC GGCCAGAAGC TCGTAGGAGA TGTCGACTAC CAGTCAGTTG
CTAAAAAGGC TGGCTTCATT ACCCCTGTCC CCGGTGGAGT TGGCCCCATG ACTGTAGCCA
TGTTGTGTTC CAACGTATTT GATGCAGCAG TTTTGCAGGC AAAGAAGGCA CACGAACACG
CCTTTCAACC TTTGCCATTG CAGTTGAAGA CTCCCGTGCC TTCTGATATT GCCATTTCGC
GTGCCCAGAA GCCTAAGAAG ATTACCAAAA TTGCTCAAGA ATTGGGTATT CTTGAAAAGG
AACTCGAACC CTATGGCCAC TTCAAAGCCA AAGTGGATCC CAGATCGGTT GTAGAAAGAT
TAGATGAACA AGTCGAAGGC TCCACCAATG AAAAGGGCCA CTACGTCTTG GTTGCTGGGA
TTACTCCTAC TCCATTAGGT GAGGGTAAGT CCACTACTAC CATGGGGTTG ACTCAAGCCT
TGGGTGCTCA TTTGGGATAC AACTCGATTG CCAATGTGAG ACAGCCATCC ATGGGTCCAA
CCTTTGGTGT GAAAGGTGGT GCTGCTGGTG GTGGTTACTC TCAGGTTATT CCTATGGACG
AGTTCAACAT GCACTTAACT GGTGATATCC ACGCTATCTC TGCTGCTCAG AACTTGCTTT
GTGCTGCTGT AGATACCAGA ATGTTCCACG AAGCCACATC AAAGACCATC AAGGGTTTCT
ACAAGAGATT GGTGCCAGCC AAGAAGGGAG AAAGAAAGTT CACTCCTTCT ATGTTGAAGC
GCTTACAGAG CCTTGGAATC ACAAAGACGA ACCCTGATGA ATTGACTGAT TCTGAAATCG
AGAAGTTTGC CCATTTGAAC ATAGACCCAG CTTCTATTAC TATCAAGAGA GTTGTAGACT
GCAACGACAG ATTCGTTCGT GAAATAACTA TCGGTGAAGG CAAGAACGAA GCTAGCAAGT
TCCCACCCAG AAAGTCTGGA ATGGATATAA CTGTAGCTTC TGAGTTGATG GCCATTTTAG
CATTGTCGAC TTCATTGAAA GACTTGAGAC AAAGAGTCGG TAAAGTCGTT GTTGGAACCC
AAAAAGAGAC TGGTATTGCT ATCACTGCTG AAGATATTGG CTGTGCTGGT GCTATCACTG
CCTTGCTTAA GGATGCAATT AAGCCTAACT TGATGCAGAC TTTGGAAGGA ACTCCTGTAT
TCGTCCATGC TGGTCCTTTT GCCAATATTT CCATTGGTGC ATCTTCCGTG ATTGCTGACC
AGTTAGCATT GAAGTTGACT TCGCCCTCCA ACCCCATCAA TAACGGTAAC AAAGGATTTG
TCGTTACTGA GGCTGGTTTC GACTTCACAA TGGGTGGAGA GCGTTTCTTC AACATCAAGT
GTAGAGCCTC TGGCTTCAAG CCAGATACCG TAGTGTTAGT TGCTACATCA AGAGCCTTGA
AATTGCATGG AGGAGCTCCA GACGTAAAAC CAGGGCAACC TTTGCCTACT GAGTATGTCA
CCGAGAACAT CGACTACTTG GTCAAGGGTT GTGCTAACTT GGCAAAACAG ATTTCTAACA
TTAAGCAGTA CAATGTTCCT GTTGTTGTAG CCATCAATAA GTTTGAAACC GATACTGATG
CTGAAATTGC TGTCATCCAA GAACAAGCTG TCAAGGCTGG TGCCGAGTTC GCCGTTCCTT
CTAATCACTG GGCTGAAGGT GGTGCTGGTG CGCTTGACTT GGCCAAATCT GTTGTAGAAG
CTGTCAAACT TTCGGACAAG AGTGCCAAAC AAACTTACCT CTACGACGTT AACTCGACTG
TGGAAGAAAA GATCTTGACC ATTGCTTCCA AAATGTACGG AGCTTCTGCT ATTGAGTTGT
CTCCATTGGC CAAGCAACAG ATAGCTACTT ATACTCAACA AGGCTACGAT AAAATGCCTA
TTTGTATTGC CAAGACCCAA TACTCGTTGT CTCATGACCC AGCCTTGAAG GGTGTTCCTA
CCGGCTTCAC TGTTCCTATC AGAGAAGTCA GATGTTCAGC CGGTGCCGGA TACTTGTATG
CTCTTGCTGC TGAGATCATG ACTATCCCAG GTTTGCCTAC CCACGCTGGT TTCATGAATG
TCGAAGTCAA TGATGATGGC GAGATCGAAG GTCTCTTCTA ACGAAACGTC TTTGATAGAC
ACCAAAATTA TGTACATTAC TCTATGCTTA TAAAGCTATG CATTATATAT TCTTAATCGT
ATACAAAAAG GATGATCTAG CAAGTGTAGA TTTAGCAAAT GCTTGGTTTA ACTAGAAGTG
AATGTTCAAC TGGCACTGAT GGTAACACTA AGCTTAAACT TCTGCTACTT TCTACTACTT
GAAAGTTTCA GGATCTGTGA TATCGGAGTC ACCATTATTG AAATCATAGC CTCTGCCGAA
GGTCACCTTG TTGTCAATGA TCTCAAAGAT CACCCTGGCC ACATCTGCTC TGGTAACTGA
GCCACTTTCG TCCCCTTCTG AAAGTACTTT GATCTTACCT TGAGGTGGAT CGTCCTTCAA
CAAGCTAGGC CTCAATATAG TGTAGTCCAA CTCGTCCTTG AATTCAGCTT CAAGGATTCG
ATCTGCATAA TGTTTGGCAA TGTAGTAGTT TCTGATCGGA GATTTCTCGA AGAATTCTCT
TGAATCCGCA TAGATGGCAC TGACAATGAT GAAACGTCTC ACTTCAGCAA TCACCAGAGC
TTCAAATGTC TTGACTGCAC CATCCAAGTC TACCTGGAGC AAGTTCTTGC CACCAGAACC
GGCTGTAAAC ACCACAGCAT CATGACCTAC AATAACTTCA ACCAAATCAC CTATAGAAGC
CGAATCCACA GTGAAAAGCT TCGTAGAAAT ATTCGATGAT TTCTGGGCAA TTTCTTGAAT
ATGATTAGCC TGCTCTTGGT TTCTCACTAC CGCAGTGGCC CTGTAAGGCG ACGAACTGGA
AGCAATGAGC TTGACCAATT GTTGACCCAC CTTTCCGTGT GCTCCAAAGA TAACGATACG
AGACATCAGG TACTTAATAA TTGAGAAAGT AATATAGTGT TGTAGATTTA CTTAACAAGA
ACAGGTTCGA ACTATTATTG ATGTTTTTGA ATTTGAAGAT TTATAGTAAT CGTAAAACTG
TTATAAATCG GCACAGTTCA ATATAATGTG TGTGTCTGAA TTTAATTTAA CAACCAATTC
TAGATTTACT AAGCAAAATG T
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| Protein sequence | MLSKHISKQL IKPVRVSRLS ARTFSLSSRN LDAVVLSGTK LAKTIRNNIA EKVIHYNQAH
YDEFANIDTI DFTALKFRPN LTIIQVGSRP DSSAYVRSKL KAAQSSNIQS TLVKLDEDIS
QEDLLEEIDR LNKNPKVNGL LIQLPLPKHI DETLVTNSVA TEKDVDGFDR YNVGELSKRG
GSPLFLPCTP SGIIELIKTT GVTLRGKNAV VIGRSDIVGT PVAALLKNED CTVTTCHRYT
KDLPEVVSRA DIVVAAVGIP EYVKAEWIKS DAIVIDVGIN YKEDSTAKNG QKLVGDVDYQ
SVAKKAGFIT PVPGGVGPMT VAMLCSNVFD AAVLQAKKAH EHAFQPLPLQ LKTPVPSDIA
ISRAQKPKKI TKIAQELGIL EKELEPYGHF KAKVDPRSVV ERLDEQVEGS TNEKGHYVLV
AGITPTPLGE GKSTTTMGLT QALGAHLGYN SIANVRQPSM GPTFGVKGGA AGGGYSQVIP
MDEFNMHLTG DIHAISAAQN LLCAAVDTRM FHEATSKTIK GFYKRLVPAK KGERKFTPSM
LKRLQSLGIT KTNPDELTDS EIEKFAHLNI DPASITIKRV VDCNDRFVRE ITIGEGKNEA
SKFPPRKSGM DITVASELMA ILALSTSLKD LRQRVGKVVV GTQKETGIAI TAEDIGCAGA
ITALLKDAIK PNLMQTLEGT PVFVHAGPFA NISIGASSVI ADQLALKLTS PSNPINNGNK
GFVVTEAGFD FTMGGERFFN IKCRASGFKP DTVVLVATSR ALKLHGGAPD VKPGQPLPTE
YVTENIDYLV KGCANLAKQI SNIKQYNVPV VVAINKFETD TDAEIAVIQE QAVKAGAEFA
VPSNHWAEGG AGALDLAKSV VEAVKLSDKS AKQTYLYDVN STVEEKILTI ASKMYGASAI
ELSPLAKQQI ATYTQQGYDK MPICIAKTQY SLSHDPALKG VPTGFTVPIR EVRCSAGAGY
LYALAAEIMT IPGLPTHAGF MNVEVNDDGE IEGLF
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