| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_74163 |
|---|
| Symbol | NUO30 |
|---|
| ID | 4841066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | + |
|---|
| Start bp | 377065 |
|---|
| End bp | 378179 |
|---|
| Gene Length | 1115 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640392381 |
|---|
| Product | NADH-ubiquinone oxidoreductase 30.4 kDa subunit, mitochondrial precursor |
|---|
| Protein accession | XP_001386464 |
|---|
| Protein GI | 150866762 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0353139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTAGTGTCTT GGTACAAAAC AGTTAGCGTC TAGTAAACTC TGTCTGTACA ATTCGGTCGT
ACATCATAGC AGTTTGTTTT CGGATTTTGT GTTTTTCTCC GCTTTTTCCA TATTGATACT
AGCACTCTTA GCTATTCATT TACAATGATC TCAAGAGCCA CCATACTTAA AAGAGTCGCT
CAAAACTCGA GATCGATAAG CTCTTGTACA GTTAGAAGCT TTTCAGCCTC CGTTTCCATC
AAGAAGGACC ATGAGTTAGT CAATTTAAAC ACCTTGCCAA GAAGAAAACC ATCTGAACTC
AATGTGCCAT TGGTGAACCC CACTGAAAAA TACAAGGAAC AGATTGAAGA ATTGCACAAG
TTCGGTGCCT ACATCATGGC TTGTATGCCT AAGTACATCC AACAGTTTTC TGTGTGGAAA
GACGAATTGA CCATCTACGT GGCTCCACTG GCCTTGAGGC CCACCATGGT GTTCTTGAAG
AACCATACCT CTGCTCAGTT CAAGTCGTGT GTAGATGTCA CTGCTGCCGA CTACCCATCC
AGAACAAACA GATTTGATGT TGTGTACAAC TTGTTGTCTG TGCGTCACAA CTCGAGAATA
AGAGTCAAGA CTTACGCTAA TGAAACCAGT GCTGTTCCAT CGCTTGTTCC TATCTACCAA
GGTGTCAACT GGTTTGAAAG AGAAACCTAC GATTTGTTTG GTATCTTCTT CGAGGGACAT
CCAGATTTGA GAAGAATCAT GACCGACTAT GGTTTTGAAG GTCACCCTTT GAGAAAGGAC
TTTCCAACTA CCGGTTACAC AGAAGTCAGA TACGACGAAG AAAAGAAAAG AGTCATCTAT
GAACCTTTGG AATTGACCCA AGCTTGGAGA AACTTCTCCG TAGGTTCTTC TGTTTGGGAA
CAGGTTGGTG AAGGTAAGGA CTTTACTCCA GAAACATTCA AGTTGCCTAC CCCAGAACCA
GAACCTACTC AAGATGAACA AAAGAAATAG AATAGAACGC AAGTTCCTAA AATTCAATAC
AATTTGAATT CGTCTGTCAT TCTCCATGCA TTTAAACACA CCTTACCACC ACTTTTTATA
CTAGAAAATC ATTACAATTG TATTTAATTT ATTGC
|
|---|
| Protein sequence | MISRATILKR VAQNSRSISS CTVRSFSASV SIKKDHELVN LNTLPRRKPS ELNVPLVNPT
EKYKEQIEEL HKFGAYIMAC MPKYIQQFSV WKDELTIYVA PSALRPTMVF LKNHTSAQFK
SCVDVTAADY PSRTNRFDVV YNLLSVRHNS RIRVKTYANE TSAVPSLVPI YQGVNWFERE
TYDLFGIFFE GHPDLRRIMT DYGFEGHPLR KDFPTTGYTE VRYDEEKKRV IYEPLELTQA
WRNFSVGSSV WEQVGEGKDF TPETFKLPTP EPEPTQDEQK K
|
|---|
| |