Gene PICST_64379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64379 
SymbolPMR1 
ID4840850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp846377 
End bp849148 
Gene Length2772 bp 
Protein Length923 aa 
Translation table12 
GC content44% 
IMG OID640392165 
Productcalcium/mangenease P-type ATPase 
Protein accessionXP_001386754 
Protein GI150866972 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01522] golgi membrane calcium-translocating P-type ATPase
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00018171 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA ACCCATTTCT GGTGTCCGCC GTGCTGGCTC CAGCCCGGTC CAGTTCTCCG 
TCGATCAAGT TCTCGCAGAA GTCGTTTGAA GACACGGCAT CAGAGCTCCA AACTAACTTG
ATAACAGGTC TTTCCAACAG TCAAGACATC TTGAACAGAA GATCTCTACA TGGAATAAAC
GAGTTGTCCA GTGAAGAAGA GGAAAGCGTC TTTTTGAAGT TTTTGTCGAA GTTCTATGAA
GATCCGTTGA TTTTGCTCTT AATCGGCTCT GCCGTGATAA GTTTCTGGAT GGGTAACGTC
GACGACGCAG TTTCCATCAC GTTAGCCATC ACTATTGTAG TAACTGTAGG GTTCGTGCAA
GAGTACAGAT CTGAAAAGTC GCTTGAAGCA TTGAACAAGT TGGTTCCTGC TGAGGCTAAG
TTGACGAGAA ACGGGTCGAC ATCAACGGTA TTGGCTTCAA CGCTTGTTCC TGGTGATTTA
GTTCATTTTT CACAGGGTGA CAGAATCCCT GCTGATGTCA GACTTACTGA GGCTGTGTAT
TTGACCATTG ACGAATCCAA CTTGACAGGT GAAAACAGAC CTGTCAAGAA GACCACTGAC
TCTCTCACAC ATACAGGAAG TGACGTCCCT CCTGTAACAA ACAGAAGCTC CATTGCTTTC
ATGGGTACCT TGGTCCGTGA TGGCCATGGC TCTGGTATAG TTGTAGCAAC CGGTGCCAAA
ACCGAGTTTG GTGCTGTGTT TGAAATGATG TCGGAAATTG AAAAGCCCAA GACGCCCTTG
CAACAGGCAA TGGATAAGTT GGGTAAGGAT TTGTCAATTT TCAGTTTCAT TGTAATTGGT
GTAATCTGTT TGATAGGCAT TTTCCAGGGC CGCTCTTGGT TGGACATGTT CCAGATCTCC
GTGTCGTTGG CTGTTGCTGC TATTCCTGAA GGTTTACCCA TCATTGTCAC CGTGACATTG
GCATTGGGAG TGTTGAGAAT GGCTCGTCGT AAAGCCATTG TCAGAAGATT GCCCAGTGTA
GAGACCTTGG GCAGTGTAAA TGTTATTTGC TCCGACAAGA CAGGTACCTT AACTCAGAAT
CACATGTCCG TCACCAAGAT ATGGTCTACT GACTTCAAAG GCAGTTTCAA CAGTCCTTTC
CTTGTCGTTG ACAAGTTGGA CGATGAAAAG TTACATCACC AACTTACTAA GAATATTCGT
AAAGTGTTGG AAACGGGTAA TGTCTGTAAC AATGCCAGAT ATTCCCACGA GAACGAAAAG
TACGTAGGTA ACCCAAGTGA TATCGCTTTG GTAGAATGTT TGCCTCATTT TGGCTTGGAA
GACATCAGAG GCACCAGAGA AAGAGTATAC GAGTTGCCAT TCTCTTCCAA CAGAAAGTAC
ATGGCTATCT GTGTTCACTC TGGTGACATG GACAAGAACG AGACGTTTGC TAAGGGGGCC
GCGGAAAAGA TTGTTCAACT TAGTAACAGA TACTATGACG AAAATGGTGA TATTAAACCG
CTTACGGACG AGTTGAGAAA CAAGATTTTG GACAGATCCC ATGACTTGGC CAACGACGGA
TTGAGAGTTT TGGCATTTGC GAGAAGCAAC AAGAAATTCT TCAACGAGAA ACACGAACAC
AGCGAGCCCA AGGAGTTGGT ATTCTGTGGT TTAGTTGGAA TGAAGGATCC TCCTAGACCC
AACGTAGCGA AGTCCATTTC GCTCTTGATG AAGGGTGGGG TTCATGTGAT AATGATTACT
GGAGATTCAC CTACGACTGC TATTAACATT GCCAAACAGA TTGGTATGCC GATTGTGGGC
GACTCTTCTG TGATGACAGG AGACCAGTTG GAGTCGTTGA GTGAACAGGC ATTGGCAGAA
GCTATCCACA ATGTTTCTGT CTTCGCCAGA ACCACTCCAG AACACAAGGT CACAATTGTA
AAAGCCTTAC AAAGAAGAGG AGATGTAGTA GCTATGACTG GTGATGGTGT CAACGATGCC
CCAGCATTGA AATTGGCCGA CATTGGTATC GCAATGGGTA AACACGGTAC CGATGTAGCC
AAAGAAGCTG CTGATATGGT GTTGACAGAC GACGATTTCT CGATTATCTT GAATGCTATC
GAGGAAGGTA AAGGGATCTT CTACAACATT CAGAACTTCA TCACCTTCCA GTTGTCCACA
TCTATTGCTG CCTTGACATT AATTGCATTG GCTACATTTT TTGGCTTGCC CAACCCTTTG
AATGCTATGC AAATTCTTTG GATTAATATT TTGATGGATG GACCTCCTGC GCAATCTTTG
GGTGTAGAGC CAGTCGATCA CGAAGTCATG AATAAACCAC CAAGAAAGCG TAACGACAAG
ATTTTGACCC AGATGGTGAT CAGGAGAGTT TTACAATCTG CTGCGATGAT CATCTTGGGT
ACGTTGTACA TCTTCATCAA GGAAATGACC GATAACGAAG TCACTGCTAG AGATACGACT
ATGACGTTCA CGTGTTTTGT TATGTTTGAT ATGTTCAATG CATTGGCATG TCGTCACTAT
TCCAAGTCGA TCTTTGAGCT TGGCCTCAAC AACCCCATGT TCAATTTTGC TGTTGCCGGT
TCGTTGATTG GCCAGTTCTG TGCTGTATAT GTGCCATTTT TCCAGGCCAT TTTCCAGACT
GAGGCATTAT ATTTGAGCGA CTTGGTCCAC TTGTTGTTCT TGACCAGTAC TGTTTTCATT
GCTGACGAAA TCAGAAAGTA CTTGCTCAGA AAGAAGAACA ACTATATGAA TGGAGGAGGC
TTTGGAGTCT AA
 
Protein sequence
MSENPFSVSA VSAPARSSSP SIKFSQKSFE DTASELQTNL ITGLSNSQDI LNRRSLHGIN 
ELSSEEEESV FLKFLSKFYE DPLILLLIGS AVISFWMGNV DDAVSITLAI TIVVTVGFVQ
EYRSEKSLEA LNKLVPAEAK LTRNGSTSTV LASTLVPGDL VHFSQGDRIP ADVRLTEAVY
LTIDESNLTG ENRPVKKTTD SLTHTGSDVP PVTNRSSIAF MGTLVRDGHG SGIVVATGAK
TEFGAVFEMM SEIEKPKTPL QQAMDKLGKD LSIFSFIVIG VICLIGIFQG RSWLDMFQIS
VSLAVAAIPE GLPIIVTVTL ALGVLRMARR KAIVRRLPSV ETLGSVNVIC SDKTGTLTQN
HMSVTKIWST DFKGSFNSPF LVVDKLDDEK LHHQLTKNIR KVLETGNVCN NARYSHENEK
YVGNPSDIAL VECLPHFGLE DIRGTRERVY ELPFSSNRKY MAICVHSGDM DKNETFAKGA
AEKIVQLSNR YYDENGDIKP LTDELRNKIL DRSHDLANDG LRVLAFARSN KKFFNEKHEH
SEPKELVFCG LVGMKDPPRP NVAKSISLLM KGGVHVIMIT GDSPTTAINI AKQIGMPIVG
DSSVMTGDQL ESLSEQALAE AIHNVSVFAR TTPEHKVTIV KALQRRGDVV AMTGDGVNDA
PALKLADIGI AMGKHGTDVA KEAADMVLTD DDFSIILNAI EEGKGIFYNI QNFITFQLST
SIAALTLIAL ATFFGLPNPL NAMQILWINI LMDGPPAQSL GVEPVDHEVM NKPPRKRNDK
ILTQMVIRRV LQSAAMIILG TLYIFIKEMT DNEVTARDTT MTFTCFVMFD MFNALACRHY
SKSIFELGLN NPMFNFAVAG SLIGQFCAVY VPFFQAIFQT EALYLSDLVH LLFLTSTVFI
ADEIRKYLLR KKNNYMNGGG FGV