Gene PICST_64135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64135 
Symbol 
ID4840900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp640545 
End bp640994 
Gene Length450 bp 
Protein Length149 aa 
Translation table12 
GC content44% 
IMG OID640392215 
Productpredicted protein 
Protein accessionXP_001386526 
Protein GI150866805 
COG category[S] Function unknown 
COG ID[COG2149] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.498947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTCTGGGACA AGATCAATGT CCTCCAGTTC ACCTCCATCA CTTTGGAGAA CAAGGGCTCT 
GTAGCTCGAG ACCACATGGC TAATGAAAGA ACGTTTCTTG CCTGGTTGCG AACATCGCTT
TCATTCATAA CAATTGGGAT TGGCGTGACT CAATTATTCA GATTAGAACA CAAGTCGTCA
TCAGTAAAGA TTAACTCCAC CGTATTGGCC CTCACTCATC CAGATGAAGA AGGCGAGCCT
ATAGCAAAGT ACGGAAAACC ATTGGGCTCA GTATTTATAG TATTGGGCAT AGTGACGTTG
ATCTTTGGCA TGCTTCGTTT CTTCAAGGTG CAGACGATGT TAACGAAGAA TTACTATCCT
GCTACACGGC TCCTGCTATT GAGCTTGATC TTAGTCGTTC TAGCAGTGAT TTTGGTGACG
TTCTTGATGG TAATCCAGGC TTCTATATGA
 
Protein sequence
FWDKINVLQF TSITLENKGS VARDHMANER TFLAWLRTSL SFITIGIGVT QLFRLEHKSS 
SVKINSTVLA LTHPDEEGEP IAKYGKPLGS VFIVLGIVTL IFGMLRFFKV QTMLTKNYYP
ATRLSLLSLI LVVLAVILVT FLMVIQASI