| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_50793 |
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| Symbol | PDX3 |
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| ID | 4841006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 492472 |
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| End bp | 493179 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640392321 |
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| Product | pyridoxine (pyridoxiamine) phosphate oxidase |
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| Protein accession | XP_001386486 |
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| Protein GI | 126139928 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00280283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.442314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCG AGCCCGTGCA CGATACACAA GTGCCTCTTC TCTTCGCTCC AGAAACGTAC
CAGTATACCA AGGGCCATCT CCAGGAAGCT GAAATCGAGA AAGACCCTCT ACTCCAGTTC
AACAAATGGT TCAAACAGGC ACAAACTGAA CTTCCTAAAG GTTCTGACAT CATTCCTGAA
TCCACCAACT TCTCAACAGC CCGCTTGCCT TCTGGTCGTG TTTCGTCTAG AATTGTCTTG
TTGAAGGAAT TGGACCATTA TGGATTTGTA GTCTACTCCA ACTGGGGTAG CTCCAAAAAG
GCTGCTGACT TCAACAGCAA TAAACACGCT TCCTTAACGT TTTTCTGGCC CCACATCCAA
AGACAGGTCA GAATTGAAGG CTTAATGGAA CCTGTCACTA GAGAGACTAC TCAGAGATAC
TTCGATACCA GACCTAGAGG TTCTAAAATC GGTGCCTGGG CTTCTCCTCA GTCTTCAGTA
ATTTCATCCA GAGACGACTT GGACAAGATC AACAACAAGT ACGAAGACAA ATTCAAGGCA
TTGAAAGACA ATGAGATTCC TGCCCCAGAG CATTGGGGAG GCATGAGAAT CGTGCCATTA
GAAGTAGAAT TCTGGCAAGG AGGAGTTTCC AGATTGCACG ACAGAATCAC ATACAGAAGA
GAAAGTATTG ACAAGAATGA ATGGGAAGTT GTGCGCCTTG CTCCATGA
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| Protein sequence | MSSEPVHDTQ VPLLFAPETY QYTKGHLQEA EIEKDPLLQF NKWFKQAQTE LPKGSDIIPE
STNFSTARLP SGRVSSRIVL LKELDHYGFV VYSNWGSSKK AADFNSNKHA SLTFFWPHIQ
RQVRIEGLME PVTRETTQRY FDTRPRGSKI GAWASPQSSV ISSRDDLDKI NNKYEDKFKA
LKDNEIPAPE HWGGMRIVPL EVEFWQGGVS RLHDRITYRR ESIDKNEWEV VRLAP
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