| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_14301 |
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| Symbol | |
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| ID | 4841034 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 74562 |
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| End bp | 79319 |
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| Gene Length | 4758 bp |
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| Protein Length | 1518 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640392349 |
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| Product | predicted protein |
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| Protein accession | XP_001386413 |
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| Protein GI | 150866725 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5219] Uncharacterized conserved protein, contains RING Zn-finger |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCTGGTGATA TAGGATACAA TGGGTTTCCT GTTCACTTGA ACTACTTCAG TTCTCTTCCA
GACCCTTCCA TTATTGTAGA TCCGACATTG GGGATTACCT TCAAGTCGTT GTTGAAGAAG
GACCCCATTA CTAAGCAGAA ATCGTTGAAC GACTTGATAT CATTAAGTAA GACAGAAAAG
TCGAGTTCCT TCCAGGATGA TCTCACCATA ATAACGTGGA TCCAATTGTA TCCAAAATTG
GCAATCGAGA ACTCGAGAGC AATTAGACTC GCATCTCATC AGGTTCAAGC CATCTTTCTC
CAATTAGTAG GAGGTAAAAA CTTCAGTAAG TACCTCAAAA GCTCGCTTCC AGTATGGTTG
CTGGGTATCT TTGATAGCGA GAAAGCCGTA GCTACTGCTA CGTACAAGTC TTTGTTAGAT
AGTTTCCAGA ATGATAGGGA TAAAGTTGAT GAAAAGATCT GGATCATCTT CTACGAACAA
ATAATAAACT ACATCAAGAC CACAATCCTG ATAGAAACTC CGAAGAGTTT GTCAGATTCC
AGATTCACAA AGGAAGAAGA CTCGGTTGTT AAGTATCAGA GAGTTCTCCA AAACAGTTTA
CAGATGTTGA TCCGAGTCAT CAAGCTTATC AATTCTGGAG GTATTCCAAT CCAGTCTGTT
GATTTCGATA TCATAGCCGA GATTATCCTG CTGGAAAAGC TTTGGAACTA CCTTGGAGAA
GCACTCGATG AGTCTACAAT GAACTATCTG TTGTTCGGAA CCTTACTCGA GTTGCTTAAG
ACAATATTTG TTGGCAATTC TGATGGAGAG TTGTCCGTAT TTGCTAAGAA TTTGACAGAT
ATAAAAAGTA TCTATAAGAC TGTCTCCAAG AAGTTCATCA AACTTGTCAA GTTGAAGAAT
AATAAGAGTA CCCCTACTGG AAACATTGTG TATTCTTCAT TCATCTTGCA GTTTTGGGAT
ACTTTGAGAG CGCTAACTCT TTTTAGTGGC TTGAAGAACA TCAAAAGTGT GAAAGTGAAA
AAGAACTTTT GGGAGCTCGG GGGGAGCAAA AGTTTTGCTC GTCTTGTAGA ATACCTCAAA
CTTGGAAGTT GTCAACTGAA TCCAGCCTAC TATACTATTA TAAGTCATTT CATTTCGTCC
CTAGCAAGTT CTGAGATAAA CATTAACGAA GACTTCCAGT TCGTAGAATT TCATGATTTT
GGGAGTGCCA CTCTTTTGAT TGGAAAAATC TTGAATAAGC AGTATAAATC ATTGAGCTCG
TTTGACTATA AGGAGAAGGC AATCCAGTGT ATTCTTAGTG TCTATGATAT TTTTTCTGAG
AGGCTAGATG ATCAGCTATT GCCTTTATTG AAACAGATAT TATATATGAC AATCGATTCG
GTTTCTGTGG ATGTTCTCAG AAGAGACGCG ATATCAAAGA AGAAAAGTAT TGAAGTTGCC
ATTAGTCAGT CCGTTGGTCA GAAGGTTGCA AACGAGAACA TGCTGAACTT TTTTGGTGAT
TTCGATAACG CACTTTCACA CCTAGTACAG AATAATGAAA GTAAATTGAG TGTTGATGGC
TTTGAGTTTA GTTCTAATGT CTCTAAAATT GTCCAGTCCT ATTTTGACAT TTTATTGCTC
GGAAACCATT TCGACATCGC TTCAGCAGTT GTCGGGAATA CTGTTGATAT ATTGGTCGAG
GATACCACTA TTGAAAAACC AGTCATTGCA TTTAATATAA TATCAACTTA TCTTGGCAGC
TTTAGGGACG TCACTGAAAA AACTCAATTG GTACCTCTTT TAGAGATTCT TCCAAGTTTT
TTTGAGCAGG ACTTTGTGAA AGAGCCTCTT GAATTGCTCA AGTCTTTCGT AACCTCCAAC
CTCCAACAGA GTTTAATAGA AGAAGCCGTA AATGGAAGCT ACCTTAAATT GACAATGGTA
GCTCCTGAGC AGAATGTGCT CTTGTTAAGA ACTCTTTCGC AGTTCATCGA TTTCGAAACC
AAAAAGGATA CCTACCCAGA GATCTATGAA TACTTGGTGG AGTTGTCTCG GAAGAAGACG
TTGACCCCAG AAGAATCTAG TTTGATCTAC AGTCAATTGA ATGTATCTGA AGTCTTCGAA
AACTTAGTTA ATGTCTCTTC TGAAGATAAG GGAAGAAGTC ATGATTTTGT AAAAGCCATT
GCGAATCTAG CTTCTATCAA TACTCTCACT AAGCATTTCG AAAGTGAAAG TTTAAAAACT
ATTGCAAGAC ATGCATGGGA AAACATTCAT GACCCTGATA TGGCCAAGTT CTTTGATTGG
ATCAAAATTG ATAGATCTTT CTTTGAACTT TCCTTATATA ACTATGTTGA AAGCTGTGGA
TTTCAAACAG ATTTTTCTAA TATTGCCAAA TATCTAGACA ATGATTTCGT ATCATTTGAT
TTATTGGAGA CTAGAGTTAA TAACGCTATG TCCCAAATTC CTAATCACTT GATTTCGATT
TCGAATCCTT TGGAGAACAA TGTATATTTG AGGGATTCAA AAATGGATTT AGTATTGGAT
AGAGGAATTA TTACATTCGG GAAATTCATT AATACTATCT TGAAGTCTAC AAAAGGAGAA
GATGAACGTC TTTATGTGTT GGGTTCGTTG ATCAGTGAAT ATATCAACGA TCTTCTTGTT
CTTGAAAGGG TAACAGAGAG AGTGCATTCC GACGAGTACC TTCAAATTCG TGAAAGTTTA
ATGTCTTGCT TGTTGAATAT CTTTAAGGAA AGTAATACTG ATATTACCAG GCTTGTTTCA
GACAATCAAA TTGAAGGAAG TTCGTTGGAT GCTAAGGTAT TGAATCACCT TAACCTGGGT
ATGAATGGCT CCGGTCTGAA TTGGGCATAT TCCGCTAGAG TCTTCAAGCG CATTCTTGAC
ATGAAGTTTG AGAGTATGTC ACTTAATACT TTTGAAGAGC TCACAATCGA CTATAGAGTA
TTACTCAAGA CCCCTATTAA ATTTGCAGCT TTCCAACTCA GCACTACGAA GTTTTTCTCT
AGTGCCAAGT TTGATAGGAT CCGAAACTTT GTAGTTGCCG AGATATTGGG AGTTAGAAAA
GAGTCTGAAA TCTTGACGGA GGGTTTAAAG TGGATATCAT TGAGTGTAAA CTTTTTCAAT
GTTGAAGAAC GTTCAGATGT TGTTCCACCT CACAGATTAG CAATGATTTG CAATCAGATT
TTCAACTGGT TGGAATCGGG AGTTGCTTAT GATGAGGAGT TTGTTTCCAT GAGAGTTCTT
TTGACAAAAT TCTTCAGCGG ATTAATTGTC AAACAGTCTG ATTTACCGGA CAAGGCATGG
GAAGTTATTT CTCGATTGCT CAGTGATAAT TTGTCTACTT GTGAAAATGA ACCATCCAGA
ATCGACTTAA AATATTTTTC GTTGAAGTTA TTAGATGTTG TTAGAAAGAA CGGAAAGGAA
AGGTATCCTG AGGAATGGAA AGAAGTTGCA AACTCCACCA GAGAAGAAAT TTTGGATCTC
TTTACCAATG CTGATATCAT ATCCGCAGAT ATACAATACA ACAACCAAGT AATCGTTCAA
TGCAATGAAT TATTCGTTAG AGTTGTTCTT GATTACGATA TTCCTGTTAA GATGTTGAAA
GCGCATGAGA ATGAGTTGTA CAACATCTTG TCAGGAGAAT TTTCTATTCC TTTAAAGCGT
GTTGCTGTTT TCTTCCTACG TAAGATCATT CTTGCAGATC AGCAGGATTT TGTTTTGGAG
TACCAATTGA AAAAGTCGAA ATTGGAGCAG ACTGAAGTCG AAGATGAGTT GGAAGTTAAT
TTACCGTCTG CACTCATTAA TATCATTCAA AAGTCATTGG AATATGATGT AGACGATGAT
GGGCTAGTAG CCACTTTTAA TTGGGGCTGG TACTTGGTCT TCGCTTACTT GGAAGACATC
ACTTATTCCC TTCGTACTGA GTACATCAAA CTATTGAAAG ACAATGGATC ATTAGATCAT
CTTTTAATTC ATATATTTGA GAGAGCAGAT GTCACCGATA ACAAGTTCTT GAAGAAATTG
TCTCCTGATG AAATTGAAAA GTCTACCAAA GTGCATAACA GTTTCATCTC GGACTACGAT
ATCAGATCTG GAATTCCTGG TGAGAGCTTT GCGTTTGAGA TGCAATTTCT CTTGCTTCAT
CATTATTTCT TATCGTTGAA GTACATTAGC TCTCCTGTCC AGACCTGGTA CAAGGAGATT
CGTGACAAGC AATTGAAACA GAGAGTTGAG AAGTTTACCA CAAAATTTGT GTCTCCATTG
CTCGTAGCAC AGATCTTGAA TGATGTGGGA GAGGCAAAAG ATAAACTAGA AAGTAGAGAC
GAGAACTTGA CTGTCAAGGT AAACAAGATC ACAAACGAGA TAAGATCAGT GTATGTAATA
GATGAACAAA CTATGGAAAT GGTGGTCAAG ATACCGCACA ACTATCCACT TGAAAGTGTT
ACAGTGGAAG GTCCATTACG TCTTGGAGTC AAGGAAATTC AATGGAAGGC GTGGCTTTTG
GCGTCTCAAA GAGTCATTTC TCTTACCAAT GGCTCTATCG TTGATGCTAT TGAGTTGTTC
AATAAGAATG TTAATCTCCA CTTTTCAGGA TTCGAAGAGT GTGCCATTTG TTACTCCATC
TTACATCAAG ACCTTTCACT TCCATCTAAA AGCTGTTCCA CTTGTAATAA CAAGTTCCAT
GCTGCTTGTT TGTACAAATG GTTCAAGAGT TCAGGTAGCA GCACATGTCC ACTCTGTCGT
TCTACGTTTA CTTTCAGA
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| Protein sequence | SGDIGYNGFP VHLNYFSSLP DPSIIVDPTL GITFKSLLKK DPITKQKSLN DLISLSKTEK
SSSFQDDLTI ITWIQLYPKL AIENSRAIRL ASHQVQAIFL QLVGGKNFSK YLKSSLPVWL
SGIFDSEKAV ATATYKSLLD SFQNDRDKVD EKIWIIFYEQ IINYIKTTIS IETPKSLSDS
RFTKEEDSVV KYQRVLQNSL QMLIRSVDFD IIAEIISSEK LWNYLGEALD ESTMNYSLFG
TLLELLKTIF NLTDIKSIYK TVSKKFIKLV KLKNNKSTPT GNIVYSSFIL QFWDTLRALT
LFSGLKNIKS VKVKKNFWEL GGSKSFARLV EYLKLGSCQS NPAYYTIISH FISSLASSEI
NINEDFQFVE FHDFGSATLL IGKILNKQYK SLSSFDYKEK AIQCILSVYD IFSERLDDQL
LPLLKQILYM TIDSVSVDVL RRDAISKKKS IENMSNFFGD FDNALSHLVQ NNESKLSVDG
FEFSSNVSKI VQSYFDILLL GNHFDIASAV VGNTVDILVE DTTIEKPVIA FNIISTYLGS
FRDVTEKTQL VPLLEILPSF FEQDFVKEPL ELLKSFVTSN LQQSLIEEAV NGSYLKLTMV
APEQNVLLLR TLSQFIDFET KKDTYPEIYE YLVELSRKKT LTPEESSLIY SQLNVSEVFE
NLVNVSSEDK GRSHDFVKAI ANLASINTLT KHFESESLKT IARHAWENIH DPDMAKFFDW
IKIDRSFFEL SLYNYVESCG FQTDFSNIAK YLDNDFVSFD LLETRVNNAM SQIPNHLISI
SNPLENNVYL RDSKMDLVLD RGIITFGKFI NTILKSTKGE DERLYVLGSL ISEYINDLLV
LERVTERVHS DEYLQIRESL MSCLLNIFKE RSSLDAKVLN HLNSGMNGSG SNWAYSARVF
KRILDMKFES MSLNTFEELT IDYRVLLKTP IKFAAFQLST TKFFSSAKFD RIRNFVVAEI
LGVRKESEIL TEGLKWISLS VNFFNVEERS DVVPPHRLAM ICNQIFNWLE SGVAYDEEFV
SMRVLLTKFF SGLIVKQSDL PDKAWEVISR LLSDNLSTCE NEPSRIDLKY FSLKLLDVVR
KNGKEREEIL DLFTNADIIS ADIQYNNQVI VQCNELFVRV VLDYDIPVKM LKAHENELYN
ILSGEFSIPL KRVAVFFLRK IILADQQDFV LEYQLKKSKL EQTEVEDELE VNLPSALINI
IQKSLEYDVD DDGLVATFNW GWYLVFAYLE DITYSLRTEY IKLLKDNGSL DHLLIHIFER
ADVTDNKFLK KLSPDEIEKS TKVHNSFISD YDIRSGIPGE SFAFEMQFLL LHHYFLSLKY
ISSPVQTWYK EIRDKQLKQR VEKFTTKFVS PLLVAQILND VGEAKDKLES RDENLTVKVN
KITNEIRSVY VIDEQTMEMV VKIPHNYPLE SVTVEGPLRL GVKEIQWKAW LLASQRVISL
TNGSIVDAIE LFNKNVNLHF SGFEECAICY SILHQDLSLP SKSCSTCNNK FHAACLYKWF
KSSGSSTCPL CRSTFTFR
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