Gene PICST_90997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_90997 
Symbol 
ID4840603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp955762 
End bp957135 
Gene Length1374 bp 
Protein Length443 aa 
Translation table12 
GC content45% 
IMG OID640391918 
Productpredicted protein 
Protein accessionXP_001386373 
Protein GI150866696 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0014] Gamma-glutamyl phosphate reductase 
TIGRFAM ID[TIGR00407] gamma-glutamyl phosphate reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTG CTGCTGAAAC CATTGCCAAG GACGGGAATG CCGCCTTTGC CATCTTGAAA 
ACTTTATCCA ACGAACAGAG GTCTGCCGCT CTTAAAGCTA TCCATGATGG CTTACAGAGC
CAGAAGCTGA GAATCTTGGA TGCAAATAAG ATAGACATGC AGAATGCCAG AGACCACAAC
CTTTCTGCTT CGCTTGTCAA GAGATTGGAT CTCTCCAATG CTGACAAGTT CGATGCCATG
TTACTGGGAA TCCTTGACGT TGCTGCTCTA GACGATCCTG TAGGTCAGGT GACATTAGCA
AGAAAGCTTG ATGAAGGTTT GAATTTGTAT CGTATCACGG CTCCTATCGG TGTTCTTTTG
ATTATATTTG AGTCACGTCC TGAAGTAATT GCAAATATCG CTGCTCTTGC CATCAAACTG
GGCAATTCTG CTATTCTCAA GGGTGGAAAG GAGTCGTATC AGACGTTCAA GGTTATGCTG
GAGATTGTAA ATGAGACGTT GGCTTCTTCC ACAGATGTCC CAGCAAAGGC TGTGCAGTTG
ATCGAGTCTC GCGAGGAAGT AGGTGATCTT TTGCTGCAGG ACAGATACAT CGACTTGGTT
ATTCCCAGAG GCTCCAACGC TTTGGTTCGA AACATCAAGG ACAACACCAA GATCCCAGTC
TTGGGCCATG CTGACGGGAT CTGCTCCATC TACGTAGACG ACGAATTCGA CTTGCAGAAG
GCCAAGAGAA TAGTAGTGGA CTCCAAAACA AATTATCCAG CTGGTTGCAA CGCTGTAGAA
CAATTGTTGC TTCATAGGAA CATTAGCGAA GAAGACATTA AAAGTCTAGT ACAAGCTCTT
CTTGATGCTA AAGTCACTGT TCATGTCACA CCAGAAGTAA AAAAGATCTT AGCGCAGACT
TCTGAGTACA TCCAGGATGC TGCCGAAGAC GCTTTTGATA AGGAGTACTT GTCGTTTGAC
ATCACCGTAG CTTTAGTGGA CGACGTAGAC GCTGCTGTTC AGCACATAAA CACTCATTCG
TCCAAACACA CAGACAGTAT CATCACCCAG AACGAAGCCA AAGCTAATAA ATTCATGAAG
GGTGTGGACT CTGCCGGTGT GTACTGGAAC GCTTCCACAA GATTTGCCGA TGGCTTCAGA
TACGGTTTCG GAACCGAAGT TGGGATCAGC ACCAACAAGA TCCATGCCAG AGGTCCAGTA
GGCTTGGAAG GGTTGATGAG CTACCAGTAC CAGCTTCGAG GAGACGGCCA CATTGTTGGA
GAATACGTAG GTGGTGGTGG AAATAAGGTG TTTGTCCATG AGGATTTGAA TCCTAAATCG
GTCAAGTTGT AGTATTAATT CTATATATAT TAATTCATGA GACAATGCAG TCAT
 
Protein sequence
MTSAAETIAK DGNAAFAILK TLSNEQRSAA LKAIHDGLQS QKSRILDANK IDMQNARDHN 
LSASLVKRLD LSNADKFDAM LSGILDVAAL DDPVGQVTLA RKLDEGLNLY RITAPIGVLL
IIFESRPEVI ANIAALAIKS GNSAILKGGK ESYQTFKVMS EIVNETLASS TDVPAKAVQL
IESREEVGDL LSQDRYIDLV IPRGSNALVR NIKDNTKIPV LGHADGICSI YVDDEFDLQK
AKRIVVDSKT NYPAGCNAVE QLLLHRNISE EDIKSLVQAL LDAKVTVHVT PEVKKILAQT
SEYIQDAAED AFDKEYLSFD ITVALVDDVD AAVQHINTHS SKHTDSIITQ NEAKANKFMK
GVDSAGVYWN ASTRFADGFR YGFGTEVGIS TNKIHARGPV GLEGLMSYQY QLRGDGHIVG
EYVGGGGNKV FVHEDLNPKS VKL