| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_66087 |
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| Symbol | |
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| ID | 4840704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | - |
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| Start bp | 745779 |
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| End bp | 748370 |
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| Gene Length | 2592 bp |
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| Protein Length | 803 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640392019 |
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| Product | predicted protein |
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| Protein accession | XP_001386339 |
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| Protein GI | 150866671 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0294] Dihydropteroate synthase and related enzymes
[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
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| TIGRFAM ID | [TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain
[TIGR01496] dihydropteroate synthase
[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.512929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAACG ACAAAGTCTT TGCCAAAGAT ATCGCTGCTA CAGCCATAAC CGGCAAGGAC
GCATGGAACA GACCTTCACC CCAACCGATA ACTATTTCTG TTAGTCTAGA TACCGATTTT
CACCAAGCGT CTGTGACTGA CAACTTGAAG TACTCGTTGA ACTATGCTGT GATTTCCAGA
AACATCTCTG AATTCATGAA AGCCAACGAA CACAGAAACT TCAAGTCCTT AGGGAACATC
GCTGAATCTG TAAGTGAAAT TGTTCTAGAT CAGAAGAAAG GAGGAGGATC CAAAGCTGAA
GTTGTAGTCA AAAGTGTCAA GTCTGAGATC AGAGCTGACA GTGTTGAGTA CAGGTTGAGC
CGTTCTAAAA CTGATTCTGA ACCAATTCCT GATGAAATCG CCGTCAGAGG TTTACGTTTG
CTTACAATCA TTGGTGTTTT TACATTTGAA CGATTCCAGA GACAGATTGT AGATATAGAT
TTGCAACTCA AGTTGCACAA GGAATCAGAC GTGTCTATAC ATGAGATCAT AGATGATGTT
GTTTCCTATG TAGAGCTGTC GAACTTCAAG ACTGTAGAAG CATTGGTGAT GAAAATTGGT
CAGTTGATCT TCCAGAACCA CCAAAAAGGT GTAACCTCTG TATTTGCTAA AGTAACCAAA
CCCAATGCCA TCAGCTATAC CGAAGGAGTT GGAGTGTCTT CCTTGATGAC CAAGGCTTCT
TTTGAGGGTG TAGAACCAAT TCCTAAGTCA GATGGATTTT CCACTCATTT GCACCCTTCA
GAAAAGTTCA ATCTTCCCAC TGCTGCTGAA GATGCCGAGA GTCAAGCTAA CGAAGAGCAC
GTAGCATATA TAGCATTTGG ATCCAATGAA GGTTGCCAGG TAGAAAATAT CCAGACAGCT
TTGAAATTGT TGGAAAAATA TGGTGTAAAG GTTCAGTCCA CTTCGTCGTT ATATATTTCC
AAGCCTATGT ACTACTTGGA CCAGCCAGAC TTCTACAATG GAGCTGTGAA GGTGACTTTT
AAGAACAAAA GCCCACACGA CTTGTTGGCC ATACTTAAGA AGATAGAGTA CGAAGACATC
AACCGAAAGA AAGAGTTCGA CAATGGTCCT CGTTCTATAG ATTTGGATAT AATACTCTAC
GACGATATCA GTGTTAACCA CGAAGACCTA ATTATTCCTC ATAAGTTGAT GTTGGAAAGG
ACGTTTGTGT TGCAGCCCAT CTGTGAATTA TTACCTCCAG ACCATATTCA CCCAGTCAGT
GCTGAGCCTA TCCATAACCA TCTTCTGCAG CTTCTCTTGA GTAAGCCCAA CGAGTCTGTC
CAAGAGTCAT CGGATTTGTT GCAGTTAATT CCGGTTCCGC GACTCGATAA CAAGGACACT
ATCTTGAAGT TTGACCAGTT GAAGAATCTG CACTCCACTT TAATAATGGG AATTGTGAAC
ATAACACCAG ACTCGTTTAG TGACGGAGGT GTGAACTTTT CCAAATCTGT AGACGAGGTC
TTGAAGACAG CAAAGAGTCT CATTGGCGAT GGTGCACATA TCTTGGATAT AGGGGGTGTC
TCTACTAGAC CTGGCAGTAA GGAACCTACT GAAGAAGAAG AGTTGCGGAG AGTGGTGCCT
CTTGTAAAGG CTATAAGAGC TTCATCAGAT AAACAATTGT CGTCTTGTTT AATTTCTGTA
GACACTTACA GAGCCAAAGT GGCAGAAGAG TGTTTGAAAG CTGGTGCCGA CATCATCAAC
GACATTTCAA TGGGCTTATA TGAGGAAGCT ATATTTGATG TAGTAGCAAA ATATGGCTGT
CCTTACATTA TGAACCACAC CCGGGGTACG GCTGCTACGA TGAGTAAGCT TACGAATTAC
GAGTCCAACA CTAACGATGA CATCATCGAA TATCTAGTGG ATCCCATTTT GGGCCATCAG
GAGTTAGATT TGACGCCCGA AGTGAATAAC CTTATCAACG GAGTTTCCCG CGAACTCAGC
TTGCAGATGC TCAAGGCGTT CGACAGAGGT GTGAGAAAAT GGCAGATCAT TGTCGACCCC
GGAATCGGCT TTGCCAAAGA CTTATCGCAG AATCTACAAC TCATCAAGCA CGCTTCTCTT
TTCAAGCAGT ACTCGGTACA AGTGAACGTC GATATCAGCG ATAGCAATCA CCGTAATGCT
AGCAATGGTA TCAAACATAT GTATGTCAGT TTCAATGGCC TAGCTACTTT GTTGGGTACG
TCTCGTAAAA AATTCTTGGG CTCCATTGTC AATCAACCTG AGGCTTCCAA GCGTATGGTC
GCTACTGCAG CTTCAGTTAT AGCATGCATA CAGCAGAAAA CTGATATTGT CCGTGTACAT
GATGTCAAGG ATATAAAGGA AGCTGTGTTA ACGGGAGACG CTATCTACAG AGATCTGTAC
AAGAAATCGT AATAGCCTAC TGTGGCTACC GTGACGAATG GAGCAACGGA GCGACTAGAT
AGTCCAGAAT GCCACTATAT AATCGTACCT TGGTGATATC TAGTTGACGG ATGTCTCGAT
ATTAGAACTG GTGACTTTAT AGTACCAAAT AATTCCATTG TCTAGCAAAT AACTTATCTA
CGAAATAATC TG
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| Protein sequence | MLNDKVFAKD IAATAITGKD AWNRPSPQPI TISVSLDTDF HQASVTDNLK YSLNYAVISR
NISEFMKANE HRNFKSLGNI AESVSEIVLD QKKGGGSKAE VVVKSVKSEI RADSVEYRLS
RSKTDSEPIP DEIAVRGLRL LTIIGVFTFE RFQRQIVDID LQLKLHKESD VSIHEIIDDV
VSYVESSNFK TVEALVMKIG QLIFQNHQKG VTSVFAKVTK PNAISYTEGV GVSSLMTKAS
FEGVEPIPKS DGFSTHLHPS EKFNLPTAAE DAESQANEEH VAYIAFGSNE GCQVENIQTA
LKLLEKYGVK VQSTSSLYIS KPMYYLDQPD FYNGAVKVTF KNKSPHDLLA ILKKIEYEDI
NRKKEFDNGP RSIDLDIILY DDISVNHEDL IIPHKLMLER TFVLQPICEL LPPDHIHPVS
AEPIHNHLSQ LLLSKPNESV QESSDLLQLI PVPRLDNKDT ILKFDQLKNS HSTLIMGIVN
ITPDSFSDGG VNFSKSVDEV LKTAKSLIGD GAHILDIGGV STRPGSKEPT EEEELRRVVP
LVKAIRASSD KQLSSCLISV DTYRAKVAEE CLKAGADIIN DISMGLYEEA IFDVVAKYGC
PYIMNHTRGT AATMSKLTNY ESNTNDDIIE YLVDPILGHQ ELDLTPEVNN LINGVSRELS
LQMLKAFDRG VRKWQIIVDP GIGFAKDLSQ NLQLIKHASL FKQYSVQVNV DISDSNHRNA
SNGIKHMYVS FNGLATLLGT SRKKFLGSIV NQPEASKRMV ATAASVIACI QQKTDIVRVH
DVKDIKEAVL TGDAIYRDSY KKS
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