Gene PICST_49619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_49619 
Symbol 
ID4840631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp792793 
End bp793314 
Gene Length522 bp 
Protein Length173 aa 
Translation table12 
GC content44% 
IMG OID640391946 
Productpredicted protein 
Protein accessionXP_001386165 
Protein GI150866528 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.624995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.141248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGAT ATATAAAGGG TGATTTGTTA GGTCATCTTC CACCAAGCAA GTCTTCGGTT 
GCTGTCTTTG CTCATGCTTG CAATTGCCAG GGTGTCTGGG GAGGAGGAAT CGCTGCTGTG
CTCAGAGTGA AATTTCCTTC TACCTATCCT TTGTATTCTG GTCATTGCCA GGAAAAAGGA
TGTGATCCAC ATAGACTTTT GGGAACATCT GTCGTAGTGC CCTCACAAGC TCTGGATCCG
GGAAACATCG CTGGATACCC CCCTAAATAC ATCGCCTGTT TGTTCACCAG CGACTTTGCC
CAGACCCAAG AGGAGATTGT AGCATATACA GATTCTGCCA TAGAGGCACT CGTGGATCAA
CTAAAAGAAT TACAAAAGAC AACTGCAATT GAGACCGGAC AAAGCGGTAA GATCGTTGTA
AATATGCCCA AGATCAATGC TGGAATCTTT GCTGTTCCTT GGGAGAAGAC TGAAGCCGTA
TTGAAGAAAT ACGATGTGGA GTTTAATGTT TATGTTATAT GA
 
Protein sequence
MIRYIKGDLL GHLPPSKSSV AVFAHACNCQ GVWGGGIAAV LRVKFPSTYP LYSGHCQEKG 
CDPHRLLGTS VVVPSQASDP GNIAGYPPKY IACLFTSDFA QTQEEIVAYT DSAIEALVDQ
LKELQKTTAI ETGQSGKIVV NMPKINAGIF AVPWEKTEAV LKKYDVEFNV YVI