Gene PICST_33381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_33381 
Symbol 
ID4840723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp466998 
End bp467405 
Gene Length408 bp 
Protein Length135 aa 
Translation table12 
GC content46% 
IMG OID640392038 
Productpredicted protein 
Protein accessionXP_001386108 
Protein GI150866485 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000249322 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGATATAG ACTCCATCAA TGAACTGGAA GGGCCCCATG AGGACTCTTC CCGCTTCAAC 
GTTTCCAATA AAGCTTTAAA CGAACCCAAA CCGTCAGATA TTGGCCGAAA ACGACACAGT
GACGTCGCAC GCGATGATCT GATGGACCTT GATGGTGAGT TCTCAGATGC CGTAGAAACC
GGCGAATTCG AGCCATCTTT CGTGACAGCA AGGTCAACTA CTGCTGATGA CTCTCTTGCC
GCTACCCAAG AAATCTCAAA TGTCCTGAAC ACCTTGAATG AAGAGCCAGA AATGTCCATT
ATGGACAGCT TTGAAACTTC AGTTTTAAAG ATTTCTGACG GAACTTATGC AGGACTATAC
TCTTCATGGT CCAAACAGTC TGGCTTCTGG GGAAACGAAA TGGTGTGA
 
Protein sequence
MDIDSINESE GPHEDSSRFN VSNKALNEPK PSDIGRKRHS DVARDDSMDL DGEFSDAVET 
GEFEPSFVTA RSTTADDSLA ATQEISNVSN TLNEEPEMSI MDSFETSVLK ISDGTYAGLY
SSWSKQSGFW GNEMV