| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33220 |
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| Symbol | |
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| ID | 4840583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 42907 |
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| End bp | 46395 |
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| Gene Length | 3489 bp |
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| Protein Length | 1162 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640391898 |
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| Product | hypothetical protein |
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| Protein accession | XP_001386026 |
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| Protein GI | 150866428 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00248788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCAA CACTACTATT CTTCCTATTT TTCTCGTTGG TCCAATCAGC AAGAATCGAC
TTCATCCCCC CGGGATGGGA TTGGTGGACT TCTGGTTGTA CAGCACAGAA AGACTGGTAT
TTGTATAAGT GCCCTCAAGG AAATGCACAA TCCCCAGGAA ACCCAGAATT CTACTCCAAC
TTCCAAGATC TCTGGTGGAT ACAAGGCAAT ACTTACAGAG CCGAATTTAA CTTTGGATTC
AATGTTGACA TGAAAAGTCA ACATCTAGAC TACTTAGCCT TAGAAGGGTT ACCTTCACCA
GACCCTCGTG TCATCGATGG TACTCTAGTC TTAGTGGACA AAGCCAATGG AATTAATTTG
TTTACTCAGA GCTGGAACCG TCTTTCATTG ACTCTCCTTA TGTTAATTGA CGCAGTTCCA
GATGATACCA GACCTGAGCC AAGACACTGT ACACCACCTT TTAATGTTGT TGGAAGATGG
TGCCAAACTC CAGAAACTCA AGGTGGACAA TGCGATACAT GGAAGTACAA CAAGGAATTT
ACTATTGTCG TCGACTGTGC TGCTCAAGAC TGTAACATAT CTCAGAAGTG TTTCAATAAG
CATTGTCCAG GAGGAACACC ATCATTACCT CCCGTACCCG ACCCAACACC AGAGCCAACA
GAAACGGATC CAGAAGAAAC CGAAACTAAA CCTACATCTG AACCAGAAAC TGAGACACCA
ACAGAGACAG ATCCAGAAAC TGAGCCTACA TCTGACCCAG AAACTGAGAC GCCAACAGAA
ACAGATCCAG AGGAAACTGA AACTGATCCA ACATCTGATC CAGAAACTGA GACACCAACA
GAGACAGACC CAGAGGAAAC TGAAACTGAT CCAACATCTG ACCCAGAAAC CGAGACACCA
ACAGAGACAG ATCCAGAAAC TGAGCCTACA TCTGACCCAG AAACTGAGAC GCCAACAGAG
ACAGATCCAG AGGAAACTGA AACTGATCCA ACATCTGATC CAGAAACTGT GACGCCAACA
GAGACAGATC CAGAGGAAAC TGAAACTGAT CCAACATCTG ATCCAGAAAC TGAGACACCA
ACAGAGACAG ACCCAGAGGA AACTGAAACT GACCCAACTT CTGACCCAAC TTCTGACCCA
GAAACCGAGA CACCAACAGA GACAGATCCA GAGGAAACTG AAACTGATCC AACATCTGAT
CCAGAAACTG TGACGCCAAC AGAGACAGAT CCAGAGGAAA CTGAAACTGA TCCAACATCT
GATCCAGAAA CTGAGACACC AACAGAGACA GACCCAGAGG AAACTGAAAC TGACCCAACT
TCTGACCCAA CTTCTGACCC AGAAACCGAG ACACCAACAG AGACAGATCC AGAGGAAACT
GAAACTGATC CAACATCTGA TCCAGAAACT GAGACACCAA CAGAGACAGA TCCAGAAACT
GAGCCTACAT CTGACCCAGA AACTGAGACG CCAACAGAGA CAGATCCAGA GGAAACTGAA
ACTGATCCAA CATCTGATCC AGAAACTGAG ACACCAACAG AGACAGATCC AGAAACTGAG
CCTACATCTG ACCCAGAAAC TGAGACACCA ACAGAGACAG ATCCAGAGGA AACTGAAACT
GATCCAACAT CTGATCCAGA AACTGAGACA CCAACAGAGA CAGATCCAGA GGAAACTGAA
ACTGATCCAA CTTCTGACCC AACTTCTGAC CCAGAAACTG AGACACCAAC AGAGACAGAT
CCAGAGGAAA CTGAAACTGA TCCAACATCT GATCCAGAAA CTGAGACACC AACAGAGACA
GATCCAGAAA CTGAGCCTAC ATCTGACCCA GAAACTGAGA CACCAACAGA GACAGATCCA
GAAACTGAGC CTACATCTGA CCCAGAAACT GAGACGCCAA CAGAGACAGA CCCAGAGGAA
ACTGAAACTG ATCCAACTTC TGACCCAACT TCTGACCCAG AAACTGAGAC ACCAACAGAG
ACAGATCCAG AGGAAACTGA AACTGATCCA ACATCTGATC CAGAAACTGT GACACCAACA
GAGACAGATC CAGAAACTGA ACCTACATCT GATCCAGAAA CTGTGACGCC AACAGAGACA
GATCCAGAGG AAACTGAAAC TGATCCAACA TCTGATCCAG AAACTGAGAC ACCAACAGAG
ACAGATCCAG AGGAAACTGA AACTGATCCA ACATCTGATC CAGAAACTGA GACACCAACC
GAGACGCCAA CAGAGACAGA CCCAGAGGAA ACTGAAACTG ACCCAACTTC TGACCCAACT
TCTGACCCAG AAACCGAGAC GCCAACAGAG ACAGACCCAG AGGAAACCGA AACTGATCCA
ACATCTGATC CAGAAACTGA GACACCTACC GAGTCAGAAT CAGAAGAATC AGAAACTCCT
AGCAGGACTT TGGAAACGGT CACGACCACA TCGACTATCA CATTAACCAC TGTTGTCCCT
TGTCCTACTG GCGGCGAGGA AACCATCACT GTGACCGAAG TGACAGTTAT TACAACTGAA
ATTGAAAAGA CCGTATCCTC ACCCACAACT ATTGTTACCG AGACTATTAC AGGTCTTCCT
GTTCCACCTG AGACGTTACC AACCGAAATT GTTACTACAG TTGTAACCTC AATTCTACCA
GTTGTAACTG TGGATACTAT TACTACTACT TCAACCATTA CTTTGACTAC CGTGGTTCCA
CATCCTACTG GCGGTGAAGA AACAATCACT GTGACTGAAC AGTCAGTAAT CACTTCTGAA
GTCCAGAAGA CCGTATCTTC TATTACAACC ATTGTTACAG AAACCGTCAT ACCGAAGCCA
TTGCCAACTC CAATTACCAT TGAATCTGTC ATTGTGACTC CTATTACCGT TACAGTTACT
AATGTTATAA CAAACACTGT TGTCGTTCCA TGTCCAACGG GAGGATACAC CACAGAAGTC
CAATTGGAAA CCGAAGAGAT CACCACCGAA GTTCTGAAAA CTGTCGTTGT TACTACTGTA
GTTACCAAGA CCGAACAACA ATCCACAATG GAAACTGTCA TCGTTTCCCA GGCAGGAAAA
GTTACTACTA CCAAGTTTAT AACCCAAACT GTTACTGAGT GTCCAGAAGT TATACAAACA
ACAATTTTCG AGACAATTGC CGGCGAGACA GTCACAAGAA CAGTTGATCA TTCCGTTTGT
GAGACCTATA TAGTTGTATG TGTTGAAGAG CCAACCAAAG AACTTGTTGA AGAAATCATT
GATGACGTTG TCCACTCATA CACCACTGAG TACACGAAGA CTTCACTGTT CACGTTAGAA
CAATTGGTTA CTGATGAAGC TGAAGAACAA CAACAATTAC CATATGAAGA TCACATTGAT
GAAGAAGACC AACTAGTTGA AGAAAGTGGA ACTTATTCAA TCGAAGAAGC CTTGGAAGGT
GCTGGTTCAC AAATGGATCC TGCGATGAAT ATGATCATGG CAATAATTGC TTTATTAGTA
TCTATCTAA
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| Protein sequence | MLATLLFFLF FSLVQSARID FIPPGWDWWT SGCTAQKDWY LYKCPQGNAQ SPGNPEFYSN
FQDLWWIQGN TYRAEFNFGF NVDMKSQHLD YLALEGLPSP DPRVIDGTLV LVDKANGINL
FTQSWNRLSL TLLMLIDAVP DDTRPEPRHC TPPFNVVGRW CQTPETQGGQ CDTWKYNKEF
TIVVDCAAQD CNISQKCFNK HCPGGTPSLP PVPDPTPEPT ETDPEETETK PTSEPETETP
TETDPETEPT SDPETETPTE TDPEETETDP TSDPETETPT ETDPEETETD PTSDPETETP
TETDPETEPT SDPETETPTE TDPEETETDP TSDPETVTPT ETDPEETETD PTSDPETETP
TETDPEETET DPTSDPTSDP ETETPTETDP EETETDPTSD PETVTPTETD PEETETDPTS
DPETETPTET DPEETETDPT SDPTSDPETE TPTETDPEET ETDPTSDPET ETPTETDPET
EPTSDPETET PTETDPEETE TDPTSDPETE TPTETDPETE PTSDPETETP TETDPEETET
DPTSDPETET PTETDPEETE TDPTSDPTSD PETETPTETD PEETETDPTS DPETETPTET
DPETEPTSDP ETETPTETDP ETEPTSDPET ETPTETDPEE TETDPTSDPT SDPETETPTE
TDPEETETDP TSDPETVTPT ETDPETEPTS DPETVTPTET DPEETETDPT SDPETETPTE
TDPEETETDP TSDPETETPT ETPTETDPEE TETDPTSDPT SDPETETPTE TDPEETETDP
TSDPETETPT ESESEESETP SRTLETVTTT STITLTTVVP CPTGGEETIT VTEVTVITTE
IEKTVSSPTT IVTETITGLP VPPETLPTEI VTTVVTSILP VVTVDTITTT STITLTTVVP
HPTGGEETIT VTEQSVITSE VQKTVSSITT IVTETVIPKP LPTPITIESV IVTPITVTVT
NVITNTVVVP CPTGGYTTEV QLETEEITTE VSKTVVVTTV VTKTEQQSTM ETVIVSQAGK
VTTTKFITQT VTECPEVIQT TIFETIAGET VTRTVDHSVC ETYIVVCVEE PTKELVEEII
DDVVHSYTTE YTKTSSFTLE QLVTDEAEEQ QQLPYEDHID EEDQLVEESG TYSIEEALEG
AGSQMDPAMN MIMAIIALLV SI
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