Gene PICST_23459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_23459 
Symbol 
ID4840667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp881149 
End bp881331 
Gene Length183 bp 
Protein Length61 aa 
Translation table12 
GC content40% 
IMG OID640391982 
Productpredicted protein 
Protein accessionXP_001386358 
Protein GI126139671 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0230] Ribosomal protein L34 
TIGRFAM ID[TIGR01030] ribosomal protein L34, bacterial type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.466482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCTTCTCCGT TGCAAACTTT TATGGGCCTT GTCCAGAGAA GATTCAAGTC CAGGGGTAAC 
ACATATCAAC CTTCCACTTT GAAGAGAAAG AGAACATTTG GATTCTTAGC CAGATTGAGA
ACAAAGAACG GAAGAAAGAT TTTATCCAGA AGAAAAGCCA AGGGAAGATG GTATTTGACC
CAT
 
Protein sequence
SSPLQTFMGL VQRRFKSRGN TYQPSTLKRK RTFGFLARLR TKNGRKILSR RKAKGRWYLT 
H