Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_20558 |
Symbol | |
ID | 4840586 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 57261 |
End bp | 58244 |
Gene Length | 984 bp |
Protein Length | 289 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640391901 |
Product | predicted protein |
Protein accession | XP_001386027 |
Protein GI | 150866429 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0845057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATATCCAAGG TCTCCGGAAT CCTATCATTG TCGGTTTGGC TCTTTGCGCA ATTACCGCAA ATCATCGAGA ACCATTTGAA CGAGTCGGTC TCCGGCGTTT CCTTGCTTTT CTTGATTTGT TGGATCGGAG GCGACGCCAC GAACCTCATA GGCTGTATCT TAACACGAGC ATTACCATTC CAAACTTGTC TCGCTGCGTA CTACTGCTTC ATTGATTGCA TTCTTAGTCT CCAGTACTGG TACTACACCA AGGTATATCC CAGACACAAA ACTCATCACA ATCTCTTGCA GAGTCCCAAC TTCTTGAGAC CTTCTACATC CAACAAAAGC ACAAATCATA GTACTCGTAG AAACCGGTTT GACCAGGACT TGAGTCGTTC GCCCATGGAG ATCAGTACTT CCATCATGGA TGTAGCACAA GGAAATGGAC ATCGTGGTCA CGATCAGAAA CGAATACATG AGGGCTCTTT CATCCACAAG ATCTTGGGCG CTACCTTCAT AGCCGGAAGC TTGCCCAAAC AGGCACATTC CATGCCCATT CCTAATCCAC AGTCTGCAGC TGTTGAAGAT TCAACTTTTC AATCTTGGAT AGGATTCGCA AAATGCTGGC TCCATAAGTT GGTGATAGTT ATACTGGCAA TTCCTCTTCA TTCTTTCAAG TTCAGATATT CACCAGAGGA TATAGGTATG ATTTCTGCGT GGACCTGTTC AACTTTGTAT GTTTCTTCAC GAGCCCCGCA GATTATCAAG AATTTCAAGC TCAAATCTAC ACGAGGCATA ACTGTGTATC TTTTTGTGTT TGCCATGTTG GGTAACATCT TCTATACCAT TTCCATCGTG CTGGACTTGT ATCTCCTTTC GCTTAACAAA TCCTATTTTG GCGAGGACGG AGATTCCAAG TTTAAGGAAG TATTTATGGA TCAGTTGCCC TTTATTGTAG GAAGTTCTGG TACTGTTCTC TTCGACTCGA TCATCATCTT TCAG
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Protein sequence | ISKVSGILSL SVWLFAQLPQ IIENHLNESV SGVSLLFLIC WIGGDATNLI GCILTRALPF QTCLAAYYCF IDCILSLQYW YYTKVYPRHK THHNLLQSPN FLRPSTSNKS TNHSTRRNRF DQDLSRSPME ISTSIMDVAQ GNGHRGHDQK RIHEGSFIHK ILGATFIAGS LPKQAHSMPI PNPQSAADIG MISAWTCSTL YVSSRAPQII KNFKLKSTRG ITVYLFVFAM LGNIFYTISI VSDLYLLSLN KSYFGEDGDS KFKEVFMDQL PFIVGSSGTV LFDSIIIFQ
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