Gene PICST_20558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_20558 
Symbol 
ID4840586 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp57261 
End bp58244 
Gene Length984 bp 
Protein Length289 aa 
Translation table12 
GC content44% 
IMG OID640391901 
Productpredicted protein 
Protein accessionXP_001386027 
Protein GI150866429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0845057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATATCCAAGG TCTCCGGAAT CCTATCATTG TCGGTTTGGC TCTTTGCGCA ATTACCGCAA 
ATCATCGAGA ACCATTTGAA CGAGTCGGTC TCCGGCGTTT CCTTGCTTTT CTTGATTTGT
TGGATCGGAG GCGACGCCAC GAACCTCATA GGCTGTATCT TAACACGAGC ATTACCATTC
CAAACTTGTC TCGCTGCGTA CTACTGCTTC ATTGATTGCA TTCTTAGTCT CCAGTACTGG
TACTACACCA AGGTATATCC CAGACACAAA ACTCATCACA ATCTCTTGCA GAGTCCCAAC
TTCTTGAGAC CTTCTACATC CAACAAAAGC ACAAATCATA GTACTCGTAG AAACCGGTTT
GACCAGGACT TGAGTCGTTC GCCCATGGAG ATCAGTACTT CCATCATGGA TGTAGCACAA
GGAAATGGAC ATCGTGGTCA CGATCAGAAA CGAATACATG AGGGCTCTTT CATCCACAAG
ATCTTGGGCG CTACCTTCAT AGCCGGAAGC TTGCCCAAAC AGGCACATTC CATGCCCATT
CCTAATCCAC AGTCTGCAGC TGTTGAAGAT TCAACTTTTC AATCTTGGAT AGGATTCGCA
AAATGCTGGC TCCATAAGTT GGTGATAGTT ATACTGGCAA TTCCTCTTCA TTCTTTCAAG
TTCAGATATT CACCAGAGGA TATAGGTATG ATTTCTGCGT GGACCTGTTC AACTTTGTAT
GTTTCTTCAC GAGCCCCGCA GATTATCAAG AATTTCAAGC TCAAATCTAC ACGAGGCATA
ACTGTGTATC TTTTTGTGTT TGCCATGTTG GGTAACATCT TCTATACCAT TTCCATCGTG
CTGGACTTGT ATCTCCTTTC GCTTAACAAA TCCTATTTTG GCGAGGACGG AGATTCCAAG
TTTAAGGAAG TATTTATGGA TCAGTTGCCC TTTATTGTAG GAAGTTCTGG TACTGTTCTC
TTCGACTCGA TCATCATCTT TCAG
 
Protein sequence
ISKVSGILSL SVWLFAQLPQ IIENHLNESV SGVSLLFLIC WIGGDATNLI GCILTRALPF 
QTCLAAYYCF IDCILSLQYW YYTKVYPRHK THHNLLQSPN FLRPSTSNKS TNHSTRRNRF
DQDLSRSPME ISTSIMDVAQ GNGHRGHDQK RIHEGSFIHK ILGATFIAGS LPKQAHSMPI
PNPQSAADIG MISAWTCSTL YVSSRAPQII KNFKLKSTRG ITVYLFVFAM LGNIFYTISI
VSDLYLLSLN KSYFGEDGDS KFKEVFMDQL PFIVGSSGTV LFDSIIIFQ