Gene PICST_19189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_19189 
Symbol 
ID4840600 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp941845 
End bp943029 
Gene Length1185 bp 
Protein Length390 aa 
Translation table12 
GC content46% 
IMG OID640391915 
Productpredicted protein 
Protein accessionXP_001386369 
Protein GI150866693 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton 
COG ID[COG5019] Septin family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AACTACTCAG TCGACAACAA CGCGTCGTCG TCAGCGTTGC GGAAAAGAAA AACGTTGAAG 
AAGTCGATCA ACTTTTCGGT CATGATTGTG GGCGAAAGCG GCCTGGGCCG GTCTACCTTG
ATAAACACCC TCTGTGGTGG AAACTCCATT GTGCCCACGT CTCTGACTGT GAACCAAGAT
CCATTCACCA AGAAGTTGAC ATTGAGACAC GAGAACGTCG AATTGGAAGA CAACGAAGGC
CACAAGATCC TGTTGAATAT CATTGACACA CCCAACTTTG CCAATCTGAT CAACTGTGAC
GAAGACTTCA AAGTCGTCGT TGACTTTATA AGACATCAAT ACGACGAGGT GTTGTTGGAG
GAGTCACGCG TCAAGCGTAA TCCTCGGTTC AAAGATGGCA GAATTCATGT GTTGATCTAC
ATGATCAACG CTACGGGTCA TGGCCTTTCT GAGATCGACG TCAAGTTCAT GTTGCACGTG
AACAACTTGG TCAACATCAT CCCTGTAATT GCCAAGGCTG ACTCCTTGAC ACCCTCCGAA
TTGAAGCTCA ACAAGGAGTT GATCTTGGAG GACTTGACCA ACTATGGCAT CAACTTCTAC
AAGTTCAACG AGTACGAATA CGAGCAGGAC TACATCGATG ACGAGATTGT TGAGTACAAC
AAGTACTTGA ACTCGCTTGT GCCTTTTGCT GTTATTGGAG CCAACGAGTA CCAGGAAAGC
CCAAATGAAG ATGATGACTT GCTCAAGCTC CGGATATTAA ATCCTAAGTT TTCCCAGCCC
ATAAACGTGG AGAACCCAGA CATCAACGAC TTCACCATCT TGAAGAACGT ATTGTTGATC
ACGCACTTGA ATGAGTTCAA GGAGTTGACC CACGACCAGA TCTACGAAAA CTACAGAACA
GAAGCTCTTT CAGGCAAGAA ATTCGAGTAC GTAGGCAGTC CTAGCAGCGA AGACTCGTCC
AAGCCTAGTG ACGAGAAGGC AGATCCAGAG TCCAACTATT TGTTGAAGGA GGAACAGATC
AAGCTTGAGG AAGAAAGATT GAAGAAGTTC GAAGAAAGAG TCCACCAGGA GTTGATCAAC
CAAAGATTGG AGCTTTTGGA AAAGGAGAAT GAATTGAAGG AAATCGAAAA GAGATTGTTG
GCAGAAGGCT TGCAGTTGGA CGAAGAAGGT GAGGTGGTCA AGATC
 
Protein sequence
NYSVDNNASS SALRKRKTLK KSINFSVMIV GESGSGRSTL INTLCGGNSI VPTSSTVNQD 
PFTKKLTLRH ENVELEDNEG HKISLNIIDT PNFANSINCD EDFKVVVDFI RHQYDEVLLE
ESRVKRNPRF KDGRIHVLIY MINATGHGLS EIDVKFMLHV NNLVNIIPVI AKADSLTPSE
LKLNKELILE DLTNYGINFY KFNEYEYEQD YIDDEIVEYN KYLNSLVPFA VIGANEYQES
PNEDDDLLKL RILNPKFSQP INVENPDIND FTILKNVLLI THLNEFKELT HDQIYENYRT
EALSGKKFEY VGNSSKPSDE KADPESNYLL KEEQIKLEEE RLKKFEERVH QELINQRLEL
LEKENELKEI EKRLLAEGLQ LDEEGEVVKI