Gene PICST_14973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_14973 
Symbol 
ID4840751 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp169255 
End bp171975 
Gene Length2721 bp 
Protein Length871 aa 
Translation table12 
GC content46% 
IMG OID640392066 
Productpredicted protein 
Protein accessionXP_001386048 
Protein GI150866443 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4935] Regulatory P domain of the subtilisin-like proprotein convertases and other proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.251561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTTC CGTTACGGAC TTTACTCCTC ATTCTCTCGG TGTTGCTTCA GGTGCAATCG 
ACAGCGATTC CCAAGAGAGA CTACGAGCTG AAGAACTACT ACATTTTCGA GATCGACACC
TCGATTTCAC AACAGCCATT AGCTGACTTC ACCAGCAAGT ACCGTCTGCA CTACAAGTTC
GAACACCAGC TTCAAGGTCT TGATAACCAC TATGTTTTCA GTATCAACAA ATCGCACCCT
CACAACGACT TCTTAGGAAA CCACAAGTCC AACGACTTCA ACTTGATGAA GAGATCTCCG
GGGTTTGAAG ACGAATACGA CTACTTGGTT TCGAACCCGC ACTTGAGATC AATTCACCAG
TTGAAGCCCA GAACTTTGTC TAAAAGAATG CCTGTCTTGA TCACAGACGA CAAGGAATAC
GAAAGAATAA TAGATAGCAA ACGTGCGGAT GCTATTACTA ATTTTCCCGT TGTTAATACT
GTAGATGCTA ATACAGATGC TGCTGGGAAT ACTGTAGATG CCTCGAAGCA GCTTTTGAAG
GACGTGTCGG ACAGTCTTAG TATCCGCGAT CCTGGCTTCA TTGAACAGTG GCATTTGATC
AACACTGCAT ATCCTGGTCA CGACGTCAAC GTCACAGGCT TGTGGTATGA AGGTATAACT
GGTACCGGTA TAGTCAGCGC AATTGTAGAC GATGGTTTGG ACGCTGAAAG TGAAGACTTG
CGTGCCAACT TCAACGCTAA GGGTTCATGG GACTTCAATG ACAACACCAA CATCCCGTTG
CCGCGCTTGT ATGACGATCA CCACGGCACT AGATGTGCTG GTGAGATCGC TGCTGTCAAG
AACGATGTCT GTGGAGTAGG TGTGGCGTAT GATTCCACAG TAGCCGGTAT CCGGATCTTG
TCTGGACCCA TTACAGCTGC CGAAGAGGCT GCCGCCTTGA TCTACGGCTT GGATGTCAAC
GACATCTACT CTTGTTCCTG GGGTCCAACC GATGACGGAA GAACGCTTGC GGAACCGGAA
ACTGTCGTGA AAAAAGCTAT GATCAAGGGT GTCCAAGAGG GTCGTAAAGA TAAGGGATCT
ATCTATGTGT TTGCCTCTGG AAACGGTGGC AGATCATATG ACTCATGCAA CTACGATGGA
TATACCAATT CCATCTTTTC CATAACAGTA GGTGCTATCG ACTACAAGGG AATTCATCCT
GATTATGCCG AGGCCTGTTC AGCCGTCATG GTGGTGACCT ATTCATCTGG CTCGGGAGAA
CATATCCACA CTACTGATAT CAAGAAGAGA TGTACAGCTA GCCACGGAGG TACATCTGCA
GCTGCACCCT TAGCAGCTGG AATCTATGCC TTGGTATTGC AAGCTAATCC GAACTTGACA
TGGAGGGATG TCCAGTATGT ATCTGTGCTA AGTTCGGTTC CCATCAACCA ACAGGATGGT
AACTATCAAA CCACAGCATT GAATAGAGAG TACTCTCACA AGTATGGTTA CGGTAAGATA
GACGCTTATC AGATGGTACA CTTTGCCAAG GACTGGAAGA ATGTAAAGCC TCAGGCGTTC
TTCTACTCCG ACATCCAGCT GGTTAGAGAG ACTTTGGAAA CGAACGCTCC TCCCCCTAAA
GAAAACAATG CGAACGATGG AGTTGAGAAA CCTCCCGCTG ATTCTCACAA GAGAGATGGC
AATATCATCC GGAAGAAGAT CACTGTTACT GAAGAGGATT TGAAGATTAT GAATGTAGAA
AGAGTAGAAC ATGTTACTGT GAAACTCAAC ATTATGGCTA CATTTAGGGG CCGTGTAGGA
GTCAGATTGA TTTCTCCCAC TGGTGTGACC AGTGACTTGG CTACTTTCCG CCCTCGTGAT
AACTCTGGTG TAGGGTTCAA GGATTGGACG TTCATGTCTG TTGCTCATTG GGGAGAGTCA
GGTTTGGGGG ACTGGACCAT AGAGGTGTTT GGAGACGAAA ATTCTTCCAA ACAGAAGAAT
ACCATTGTCT TTGAAAACTG GCAATTGCGT TTCTTTGGTG AGTCTATTGA TGCCGACAAA
GCTGAAACAT ACGAGTTAGA AAAGGACTAT GCTGCTGTTA GAAGAGACAG ACTTTCGCAG
AACAATGACA AGCAACCTGA GACAACTTCA GAGACTTTGT CATCGTCTGA GAGTGTGTCA
TCTTCAGAAG TTGGAACCTC AACTGTGTCT ACTGAGAGCT CTACAAGTGT AACTAGTACT
TCAGACTCTA CAACACCTGT AGAAGAGGAT CACAATGCTG AAAAAGTAAC AGAAAGTGTT
TCCGCTAGCT CGAGTTCTAC CCAAGACGCC GAGGCTACGG AGTCGAGTGG AGCAGAAGAA
GATGAAGACG GCAAGTTGAA ATATTCCGCA GACCATACGG GCCAGTATTT TATGGCACTT
GCTGTTGTCG GCTTTATAGT CATCATTCTT TTCATGAAGT TCTTCAAGAC GCCAGGAAGC
GGCAGAAGAA GAAGAAGAGA GGATTTTGAG TTTGACATAA TTCCTGGCGA GGACTATTCT
GACAGCGAAG ACGACGAAGA TTCTATGGAA TTTGGACGTA GAAGCGGAAG AAGAGCACCA
CCAGCACCTT CATTTATTCC TAATGAAGTC GACGATGAGG ACGACGATCG TGCCAGAGAT
AGAGTCTATG ATGAGTTCAA TAGCGACACA TTGCCCGAGT ACGAAGAAGA GATGTTTAGA
ATAGACGACG AGGATGAGGA C
 
Protein sequence
MLFPLRTLLL ILSVLLQVQS TAIPKRDYES KNYYIFEIDT SISQQPLADF TSKYRSHYKF 
EHQLQGLDNH YVFSINKSHP HNDFLGNHKS NDFNLMKRSP GFEDEYDYLV SNPHLRSIHQ
LKPRTLSKRM PVLITDDKEY ERIIDSKHAN TDAAGNTVDA SKQLLKDVSD SLSIRDPGFI
EQWHLINTAY PGHDVNVTGL WYEGITGTGI VSAIVDDGLD AESEDLRANF NAKGSWDFND
NTNIPLPRLY DDHHGTRCAG EIAAVKNDVC GVGVAYDSTV AGIRILSGPI TAAEEAAALI
YGLDVNDIYS CSWGPTDDGR TLAEPETVVK KAMIKGVQEG RKDKGSIYVF ASGNGGRSYD
SCNYDGYTNS IFSITVGAID YKGIHPDYAE ACSAVMVVTY SSGSGEHIHT TDIKKRCTAS
HGGTSAAAPL AAGIYALVLQ ANPNLTWRDV QYVSVLSSVP INQQDGNYQT TALNREYSHK
YGYGKIDAYQ MVHFAKDWKN VKPQAFFYSD IQSKPPADSH KRDGNIIRKK ITVTEEDLKI
MNVERVEHVT VKLNIMATFR GRVGVRLISP TGVTSDLATF RPRDNSGVGF KDWTFMSVAH
WGESGLGDWT IEVFGDENSS KQKNTIVFEN WQLRFFGESI DADKAETYEL EKDYAAVRRD
RLSQNNDKQP ETTSETLSSS ESVSSSEVGT STVSTESSTS VTSTSDSTTP VEEDHNAEKV
TESVSASSSS TQDAEATESS GAEEDEDGKL KYSADHTGQY FMALAVVGFI VIILFMKFFK
TPGSGRRRRR EDFEFDIIPG EDYSDSEDDE DSMEFGRRSG RRAPPAPSFI PNEVDDEDDD
RARDRVYDEF NSDTLPEYEE EMFRIDDEDE D