| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90563 |
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| Symbol | URA2 |
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| ID | 4840174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1068194 |
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| End bp | 1075893 |
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| Gene Length | 7700 bp |
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| Protein Length | 2211 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391489 |
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| Product | multifunctional pyrimidine biosynthesis protein (PYR1) |
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| Protein accession | XP_001385901 |
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| Protein GI | 150866340 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
[COG0505] Carbamoylphosphate synthase small subunit
[COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase
[TIGR01368] carbamoyl-phosphate synthase, small subunit
[TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0682407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AATTGCCAAT CCGTGGTAGT CAAGGAGTAT GTACTGTGTT AACTGTTGAG AAAGAGACGC
TGTAGCGTTG TAGTGTGAGA GAGAAGAGAA CATGTTTGAA ATGACCAGAT CTTTGATAGA
TTTCTCTGAG AATACTAAAG ACTATGAACG ACGATGGATG TGATGCCGAC AGGACATGGA
TGTTGGGATT GCGATCGTGA TATTGTCTGC TAGTTGCTCT TAGTTCATAG CTGATTGCTC
TAGTCAAAAG CCAGTTGCTG TTACTGAGAC GTGATTCACG TTTGCAATTT TTGTTCATAC
TTCAATTTTG ATTTAGAAAT TCAATCTTAA GGTTGAAGTC ATGGAACGTA TCCATTTTCA
CTTCATCCCA TCTCATCTTA GTATTCCACT AGTGTTCCCA GACTGTTCTT TTGGAGCTCT
CACATTCTAT TATGGCCCGG TTTCGCAATT TTGCCGGAAC TCGTATCTCA TCGCAGATCC
GGGCGATGAC TGAAAAATTA TAGTTTCTCC AGATCTTACC ATCTCTCTGT CAGAGCACCA
TTCACCTGGC CACTCTTTCT CACTTCAGTC ACTTTGTAGC AGCCTACTAA CGCCGTTAGC
CATAGTTGAT ATTTCTTTTC TCGAGTATTT TGATCTTCCC CCAATTGAAG TGCTCCCTTC
CCCATTCTCT AAAGAAATAC CTGTCTAGAA ATCATGGTTG CTCAATTATC CGCTCCTATT
TCTCCTCCAA TGGAGTCTAC TGGTGACAGG TTGATGACCT TGGAGACGTA CGATGGAATC
GCCTTGCAAG GTTACTCCTT TGGTGCTCCT GTTGCTGCTT CTGGTGAACT TGTTTTCCAG
ACTGGTATGG TAGGCTATCC TGAGTCTCTC ACTGATCCTT CGTATGAGGG CCAGATTTTG
GTTATCACCT ATCCTTTAGT TGGTAACTAC GGTGTCCCAG ACAGAGAACT TTTGGACGAC
GACTACCTGC CAGCTTTGCC AAAGTATTTT GAGTCGAGCA AGATCCACAT TGCTGGTTTG
GTTGTTGCTC ATTATACTGA GGACTACTCC CACTTCTTGG CCAAGTCGTC TTTGGGCCAA
TGGTTGCAAA AGGAAGGTAT TCCCGCTGTG TACGGTGTCG ACACCAGAGC CTTGACCAAG
AATTTGAGAG ATAAGGGATC TACTTTGGGT AGATTAGCTC TTTCCAATGA TTCTGTCAAG
TCTGAAACCA TCTTGGCTTC TCCTGCCGAC TGGGAACAAC ACTTTGAAAT TCCTGAGTGG
GACGACCCCA ACGTCAAGAA CTTGGTAGCC AAAGTATCCA CTGACAAGCC AGTGTTGTAC
ACCCCCAAGT CTGGCATCAA GACCGGCAAG AACGGCAAGC CTATCAGAAT CGTAGCTGTT
GATGTAGGTA TGAAGTACAA CCAGATCCGT TGTTTCGTCA GAAGAGGTGT AGAGTTATTG
GTGGTTCCAT GGGACTACGA CTACACCACT GAAGAATACG ATGGTTTGTT CATCTCTAAC
GGTCCAGGTG ATCCCTCGGT TATGACCGAA ACTGTCAAGA GATTACAGGG TGTCATTTCC
GAAGGAAAGA CTCCAATTTT CGGGATCTGT TTGGGCCACC AGCTTATGGC CAGAGCCACT
GGAGCCTCGA CCTTGAAGTT GAAGTTCGGT AACAGAGGTC ACAACATCCC CTGTACCTCC
ACGATTTCTG GAAGATGTTA CATCACTTCT CAGAATCACG GTTTCGCTGT GGATGCAAAC
ACCTTAGCTT CTGGTTGGAA GGAGTTGTTC GTTAATGCTA ATGATGGCTC CAACGAAGGT
GTTTATCACG AGCTGAAGCC ATTCTTTTCG GTTCAATTCC ACCCAGAATC CACTCCTGGT
CCTCGTGACA CCGAGTTCCT CTTTGACGTC TTTATCAACT CTGTGGTCGA CTTCAACAAG
AACGGTGTCT ACAAACAGGT AGCCTTCCCA GGTGGCCTTC TTGCAGACAA CAGAGCTGCT
CACCCTAAGG TTGATGTCAA GAAGGTTCTT GTGTTGGGAT CTGGTGGTTT GTCTATTGGT
CAAGCTGGTG AATTTGACTA CTCTGGTTCT CAGGCTATCA AGGCCTTGAA GGAAGAAGGC
ATTTACACTA TCTTGATCAA CCCTAACATC GCTACAATCC AGACCTCCAA GGGTTTAGCC
GACAAGGTCT ATTTCTTGCC TGTAACACCT GAATTTGTAA GAAAAGTCAT TAAGCACGAA
AGACCCGATG GTATCTACTG TACTTTTGGT GGTCAGACTG CTCTTTCTGT CGGTATCGAT
TTGAAGGACG AGTTTGCCGA TCTCGGTGTC AAGGTTCTTG GTACTCCTAT TGATACCATC
ATTACTACTG AAGACAGAGA GTTGTTTGCT AGCGCCATGG CTGACATCAA CGAAAAATGT
GCCAAATCTG AAGCTGTCAG CACAGTCGCG GAAGCAGTGA TTGCTGCTAA CAATATCGGC
TACCCATTGA TTGTCAGAGC TGCCTACGCT TTGGGTGGTC TTGGTTCTGG TTTCGCCGAT
AACGAGGAAG AGTTGGTCGA ATTGTGTAAC AAGGCTTTCG CTACTTCTCC ACAAGTCCTT
GTAGAAAGAT CCATGAAAGG ATGGAAGGAG GTTGAGTACG AAGTCGTTCG TGATGCTTTC
GACAACTGTA TCACAGTTTG TAACATGGAA AACTTCGATC CTTTGGGTAT TCACACCGGT
GACTCTATTG TCGTAGCTCC TTCTCAAACG TTGTCGGACG AAGACTACAA TATGTTGAGA
ACTACAGCTG TCAACGTCAT CAGACACTTG GGTGTTGTTG GTGAGTGTAA CATCCAGTAT
GCCTTGAACC CATTCTCCAA GGAATATTGT ATCATTGAAG TCAACGCCAG ATTGTCCCGT
TCGTCTGCAT TGGCCTCTAA AGCTACTGGT TACCCATTGG CTTACACTGC TGCCAAGCTT
GGTTTGAACA TTCCTCTTAA CGAGATCAAA AACTCCGTCA CCAAGAAGAC TTGTGCTTGT
TTCGAGCCAT CTTTGGATTA CGTAGTTGTC AAGATCCCAA GATGGGACTT GAAGAAGTTC
ACCAGAGTGT CGTCGTTGTT GTCGTCGTCG ATGAAGTCTG TCGGTGAAGT CATGTCGATC
GGTAGAACTT TTGAAGAAGC CATTCAGAAG GCTATCAGAT CCACCGATTA TCAGAACTTG
GGTTTCAACA AGACTTCTGC CTTGATGTCT ATCGACATCG ACAGCGAGTT GCAGACTCCT
TCTGACCAAC GTTTGTTTGC TATTGCCAAT GCCCTTTCCG ATGGCTACTC TGTCGAAAAG
GTCTGGTCCT TGACCAAGAT CGACAAATGG TTCTTGAACA AGTTGGACGG ATTGATCAAG
TTTGGAAACA AAATTTCTTC ATATGTATCC AAGGAAAACT TGCCTACCTC CGTGTTGAGA
CAGGCTAAGC AACTTGGCTT CGAAGACAGA CAGATCGCAA AGTTCTTGAG CTCTAACGAA
GTTGCCATCA GAAGATTGAG AAAGGAAGCT GGTGTGATTC CTTTTGTCAA GCAAATCGAT
ACGGTTGCCG CTGAATTCCC TGCCTTCACC AACTACTTGT ACATCACCTA CAATGCTGAT
TCTTCCGATG TCACCTTCGA TGAACATGGT GTTATTGTTC TTGGTTCTGG TGTCTACAGA
ATTGGTTCTT CCGTCGAGTT CGACTGGTGT GCTGTGAGAG CCATCAGAAC TTTGAGAGAA
AACGGCCACA AGACTATTAT GATAAACTAC AACCCGGAAA CTGTTTCTAC TGATTATGAC
GAAGCCGACA GATTGTACTT TGAAACAATA AACTTGGAAA GAGTGTTAGA TATCTACGAA
TTGGAACAGT CCAATGGTGT TATTATCTCT ATGGGTGGTC AAACGTCCAA CAACATTGCT
TTACCATTGC ATCGTCAAAA CGTGAAGATT TTGGGAACTT CGCCAGAGAT GATCGACTCT
GCTGAAAACA GATACAAGTT CTCTAGAATG TTAGACAAAA TTGGTGTCGA TCAACCAGCC
TGGAAGGAAT TGACTTCCAT TGCTGAAGCC GAAGAGTTCG CCGAAAAGGT CACTTATCCT
GTTTTGGTCA GACCATCTTA CGTTCTTTCT GGTGCTGCTA TGAATACCGT CTATTCCAGA
GACGATTTGG CTTCTTATTT GACTCAGGCT GTAGATGTTT CTCCTGATTA CCCAGTTGTC
ATCACCAAGT ACATCGAAAA CGCTAAGGAA ATTGAGATGG ATGCCGTCGC CAGAGACGGT
AAGATGATCA TGCACGTAGT TTCTGAACAC GTCGAAAATG CTGGTGTCCA TTCTGGTGAC
GCCACATTGA TTGTTCCTCC TCAAGATTTG GATCCAGAAA CTGTGAGAAG AATCGTAGAA
GCTACCGCTA AGATTGGTAA AGCTCTTGAC ATTACTGGTC CATATAACAT CCAGTTTATT
GCCAAGGATA ACGATATCAA GGTTATCGAG TGTAACGTCA GAGCCTCGCG TTCTTTCCCA
TTTATTTCTA AGGTTGTAGG CACCGACTTG ATTGAAATGG CCACAAAGGC TATCATGGAC
TTACCACTTA CTCCTTACCC CGGAGAAAAG TTGCCTGAAG ATTACTGTGC TGTCAAGGTT
CCACAATTCT CGTTCTCTCG TTTGGCTGGT GCAGATCCTG TCTTGGGTGT CGAAATGGCT
TCTACTGGTG AAGTAGCTAC ATTTGGTAGA AACAAATATG AAGCCTACTT GAAGTCGTTG
ATCTCGACTG GCTTCAAGTT ACCTAAGAAC AATGTGTTGT TCTCCATTGG ATCGTACAAG
GAAAAGCAAG AATTGCTTCC ATCCATTGCC AAGTTGCACG AGTTGGGCTA CAAGATCTTT
GCTACTGCCG GTACTGCCGA TTTCATCAAG GAACACAATA TCCCTGTTCA TTATTTGGAA
GTGTTGGGCA AGTCTGAAGA CCAAAAGTCG GAATACTCGT TGACTCAGCA TTTGGCTAAC
AATTTGATTG ACTTGTATGT CAACTTGCCT TCTTCCAACC GATTCCGTCG TCCAGCCTCG
TACATGTCTA AGGGTTACGA GTCTCGTCGT ATGGCTGTGG ACTATTCTGT TCCTTTGGTA
ACTAATGTCA AGTGTGCCAA GTTGTTGGTA GAAGCCATTG CCAGAAACAT TCCACTTGAA
GTCTCCAACA GAGATGCCCA AACTTCTCAC AGAACAACTG TTTTGCCAGG TTTGGTCAAC
ATCACCTCGT TTGCTACTTC ATTCGATGAC TTCGAAGCCA CCACTAAGGA ATCCTTGGCC
GCAGGCTTCA CATTCAACGC TTTCTTGCCT CAGACTTTAG CTGGTTCAGT AGTCACAGAC
TTCGACTCGT TGCTTGAAGC CATCGATTTT GCTGGTTCTG CTGCCTACAC CGACTACTCG
TTCTCAATTG CTGCTAACGA TGCCAACGCA AACGAGGTTC TTGAAGCTGC CCAGAACGCT
GGTGCTTTGT TCTTGCCATT TAACGATTTG GCCAACTCCA AGGTATCTGC CATCTCGACT
CACTTTGCCT CATGGCCAGA AAACAAGCCA ATTATCAGTG ACGCTAAGAC TACTGATTTA
GCTTCTGTTT TATTGTTAGC TTCGTTGCAT AACAGATCAA TTCACATTAC CAATGTTTCT
TCTAGAGAAG ACTTGGAGTT GATCAAGATG GCTAAAAGTA AGGAATTGAG AGTCACCTGC
GATGTAGCTG TCTACTCGTT GTTCTTATCC AGAGACGAGC TTGACGTTCC ATTTTTGCCC
ACCAAGGAAG ACCAGGACTA CTTGTGGGAC AACATCGCTG ATGTTGACTG TTTCTCCATC
GGTGTATTGC CATACTTGGT CGCTAAGGCT ACTGGTAAGA AGGTTGTTCC AGGTTTGGGT
ATCAACGAAG CTCTTCCATT ACTTTTGAGC GCCGTCAAGG ACGGTCGTCT TACCCTCGAC
GACATCGTTG AACGTTTCCA CAACAACCCA GTGAAGATTT TCAATATTCC AAAGCAGGAT
GCCACTTCTG AAATCGACTT GGACAGATTT GTTTCTTCTA CTACAAAGAA TGTAGCTTCC
ATTTTCCAAC ACAAGAAGTT GCAAGGTTCA GTTGACAGAG TGTTGTTGCA TGGCGAAACT
GTTTGTTTGG ATGGTACTGT TCTGGCCGAA GCTTTAGGTA AGAATGAAGT CGAACCCAGA
GCCAGATTTA GCTCCATCAC CAACATTCCA GCATCTCCAG TTCCAAGAAA GGCTAGAGCC
TCTTTCACTG CTGACTTACG CCGTCCATCT CTCATCAAAG ACTTGCAGAC ACAACCTTTG
CCTACTGATT TCGAAAAGTT TGGTAAAGAG TTGGTTTCGC AGCCTCCAGC TGGTTCTTTG
AGCGAGGGTA ACGCTTTGGT GAACTACATC AGACACCACA ACACCTTCTT GAGAAACTCT
GTTTTGTCTG TCAAGGACCT CACCAGGTCT GACATGCACT CATTGTTCAC AGTAGCCCAA
GAGATGAGGT TGGCTGTAGA AAGACAAGGT GTCTTGGACA TCTTGAAGGG CAGGGTTTTG
GCTACTATGT TCTATGAGCC TAGTACCAGA ACTTCTTCTT CTTTCGATGC TGCTATGCAA
AGATTGGGTG GAAGAGTTGT AGCTGTAGAA TCCGGTTCTT CTTCCGTAAA GAAGGGTGAG
ACCTTGCAAG ATACAATCAG GTCGTTGGCT TGTTACGCTG ATGCCATTGT ATTGAGACAT
CCATCTGAAG AGTCGGCTGA CATCGCTGCT AAGTACTCTC CGGTTCCAAT TATCAACGGT
GGTAATGGCT CTAAGGAACA TCCAACCCAA GCTCTCTTGG ACTTGTTCAC TATCAGAGAA
GAGTTGGGTA CTGTGAATGG TATCACTGTC ACGTTCATGG GTGACTTGAA GTATGGAAGA
CCAGTTCACT CCTTGATCTA CTTGTTGCGT CACTACCAGG TGAGAATCCA GTTGGTCGCA
CCTAAGGAGT TGGCTCTTCC AGAATCAATT AAGAACATCT TGATCGAAAG TGGTATTAGG
GTAACTGAAT CTGAAGAGTT GACTAAGGAC ATAATCGCCA GATCTGACAT CTTGTATTGT
ACCAGAGTCC AGGAAGAAAG ATTCTCTGAC AGAGAACAGT ACTTGAGATT GAAAGACACC
TACATTGTTG ACAACAAGAT TTTGTCTTAC GCCAAACAAC ACATGGCTGT TATGCATCCA
TTACCAAGAA CTTCTGAGAT TCGTGAAGAA GTCGACTTTG ACCAGAGAGC TGCTTACTTC
AGACAAATGA GATATGGATT GTTTGTCAGA ATGGCTCTTT TGGCCATGGT GGTTGGTGTT
GACTTTTAGG CTTGCTGCTA CAATTGGGGA ATTGTTCAGT TTCATTGATC ATAAAGATCA
CAATATTAAA CATCATCATA AACATCATTC TTATCTTCCA TTATACTTTT CACGATTCAA
AATTTATACA TTAGAGCTAT GGTTATGGCT GGGGCTTTCG GGGGAAAGCA CCGGCAGCTT
ACTCTAGACT CTTTATAAAA TCTTAATATA CTTGATTTCT AATATTAATA GTTGAAGTAG
CTGTACTTCT TAACGAGTGG CCATGTCATT TTCACAATAC GAAAGGCATG TTATAGTAAA
TGCATCTTCA CCGTAATTAC AATACTACAC TTCCACTTCT TCATCATAAT ATTTCTATTA
TATATACATT TAGTACAGTT
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| Protein sequence | MVAQLSAPIS PPMESTGDRL MTLETYDGIA LQGYSFGAPV AASGELVFQT GMVGYPESLT
DPSYEGQILV ITYPLVGNYG VPDRELLDDD YSPALPKYFE SSKIHIAGLV VAHYTEDYSH
FLAKSSLGQW LQKEGIPAVY GVDTRALTKN LRDKGSTLGR LALSNDSVKS ETILASPADW
EQHFEIPEWD DPNVKNLVAK VSTDKPVLYT PKSGIKTGKN GKPIRIVAVD VGMKYNQIRC
FVRRGVELLV VPWDYDYTTE EYDGLFISNG PGDPSVMTET VKRLQGVISE GKTPIFGICL
GHQLMARATG ASTLKLKFGN RGHNIPCTST ISGRCYITSQ NHGFAVDANT LASGWKELFV
NANDGSNEGV YHESKPFFSV QFHPESTPGP RDTEFLFDVF INSVVDFNKN GVYKQVAFPG
GLLADNRAAH PKVDVKKVLV LGSGGLSIGQ AGEFDYSGSQ AIKALKEEGI YTILINPNIA
TIQTSKGLAD KVYFLPVTPE FVRKVIKHER PDGIYCTFGG QTALSVGIDL KDEFADLGVK
VLGTPIDTII TTEDRELFAS AMADINEKCA KSEAVSTVAE AVIAANNIGY PLIVRAAYAL
GGLGSGFADN EEELVELCNK AFATSPQVLV ERSMKGWKEV EYEVVRDAFD NCITVCNMEN
FDPLGIHTGD SIVVAPSQTL SDEDYNMLRT TAVNVIRHLG VVGECNIQYA LNPFSKEYCI
IEVNARLSRS SALASKATGY PLAYTAAKLG LNIPLNEIKN SVTKKTCACF EPSLDYVVVK
IPRWDLKKFT RVSSLLSSSM KSVGEVMSIG RTFEEAIQKA IRSTDYQNLG FNKTSALMSI
DIDSELQTPS DQRLFAIANA LSDGYSVEKV WSLTKIDKWF LNKLDGLIKF GNKISSYVSK
ENLPTSVLRQ AKQLGFEDRQ IAKFLSSNEV AIRRLRKEAG VIPFVKQIDT VAAEFPAFTN
YLYITYNADS SDVTFDEHGV IVLGSGVYRI GSSVEFDWCA VRAIRTLREN GHKTIMINYN
PETVSTDYDE ADRLYFETIN LERVLDIYEL EQSNGVIISM GGQTSNNIAL PLHRQNVKIL
GTSPEMIDSA ENRYKFSRML DKIGVDQPAW KELTSIAEAE EFAEKVTYPV LVRPSYVLSG
AAMNTVYSRD DLASYLTQAV DVSPDYPVVI TKYIENAKEI EMDAVARDGK MIMHVVSEHV
ENAGVHSGDA TLIVPPQDLD PETVRRIVEA TAKIGKALDI TGPYNIQFIA KDNDIKVIEC
NVRASRSFPF ISKVVGTDLI EMATKAIMDL PLTPYPGEKL PEDYCAVKVP QFSFSRLAGA
DPVLGVEMAS TGEVATFGRN KYEAYLKSLI STGFKLPKNN VLFSIGSYKE KQELLPSIAK
LHELGYKIFA TAGTADFIKE HNIPVHYLEV LGKSEDQKSE YSLTQHLANN LIDLYVNLPS
SNRFRRPASY MSKGYESRRM AVDYSVPLVT NVKCAKLLVE AIARNIPLEV SNRDAQTSHR
TTVLPGLVNI TSFATSFDDF EATTKESLAA GFTFNAFLPQ TLAGSVVTDF DSLLEAIDFA
GSAAYTDYSF SIAANDANAN EVLEAAQNAG ALFLPFNDLA NSKVSAISTH FASWPENKPI
ISDAKTTDLA SVLLLASLHN RSIHITNVSS REDLELIKMA KSKELRVTCD VAVYSLFLSR
DELDVPFLPT KEDQDYLWDN IADVDCFSIG VLPYLVAKAT GKKVVPGLGI NEALPLLLSA
VKDGRLTLDD IVERFHNNPV KIFNIPKQDA TSEIDLDRFV SSTTKNVASI FQHKKLQGSV
DRVLLHGETV CLDGTVSAEA LGKNEVEPRA RFSSITNIPA SPVPRKARAS FTADLRRPSL
IKDLQTQPLP TDFEKFGKEL VSQPPAGSLS EGNALVNYIR HHNTFLRNSV LSVKDLTRSD
MHSLFTVAQE MRLAVERQGV LDILKGRVLA TMFYEPSTRT SSSFDAAMQR LGGRVVAVES
GSSSVKKGET LQDTIRSLAC YADAIVLRHP SEESADIAAK YSPVPIINGG NGSKEHPTQA
LLDLFTIREE LGTVNGITVT FMGDLKYGRP VHSLIYLLRH YQVRIQLVAP KELALPESIK
NILIESGIRV TESEELTKDI IARSDILYCT RVQEERFSDR EQYLRLKDTY IVDNKILSYA
KQHMAVMHPL PRTSEIREEV DFDQRAAYFR QMRYGLFVRM ALLAMVVGVD F
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