| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_90238 |
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| Symbol | |
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| ID | 4840413 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1310674 |
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| End bp | 1313697 |
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| Gene Length | 3024 bp |
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| Protein Length | 821 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640391728 |
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| Product | predicted protein |
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| Protein accession | XP_001385948 |
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| Protein GI | 150866371 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGAAAACATC CCCAAACTCC GTTTTACTTC TGCTAGTCTT GGTTCCTGTT CTCTGGTGTA
GTTCCCCCGC TTTTCCTTTG CTCCAATGGC CAAGAAACAG TCCTCGGCTG CTAAAGCTGC
TGCGCTCAAG GCCAAACAAG CTCCTTCCCT ACTTCTGGTG GATCCAGTAG TGGATCCGGT
TTTCGCTCAA GGTGCTATCC GCTCGTATCT AGTGACCGAC CCGGCTCCAA CTTTGCTTAA
AAAGCGTTCT TTGCTCGGTT CCAACGAATG GATTCTTATC GCTGTTCTAC TTGTGGCTTC
TTACTACGTG AGAATGTACA ACTTGTCGTA TCCCAAATCT GTGGTGTTTG ACGAAGTACA
CTTCGGAGGC TTTGCCAGAA AGTATATTCT CGGTAAATAC TTCATGGATG TGCACCCACC
GTTGGCAAAG ATGCTTTTTG CAGCTGTTGC TTCCTACGGA GGCTTCAAGG GTGATTTTGA
ATTCAAGAGT ATTGGTGACT ACTTCCCTGA AGGTACACCC TATGTTCTCA TGAGACAGTT
CCCCGCGTTG TTGGGTATCG GCACGGTACT CTTAGCGTAC TTCACTTTGC GTAGTTCCGG
CGTTAGACCT GTCATTGCTT TTGCTACCAG TTTTCTTTTG TTGGTAGAGA ACTCCAACGT
AACAATCAGT AGATACATTC TCTTGGACTC TCCACTTCTT TTCTTCATTG CTGCATCCAT
TTTTGCCTGG AAGAAGTTCG AGATTCAGAC CCCTTTCTCC GCTGGCTGGT TCAAGAGTTT
GATTGCTACC GGTGTTGCTC TTGGTTTAGC TCTTAGTTCC AAGTGGGTGG GCCTTTTCAC
TGTAGCTTGG GTAGGTCTCT CCTGCGTGTA TCAGATGTGG TTCATCGTTG GTGACTTGTC
CGTCAGCGCT AAGAAGGTCG TTGCCCATGC TTTCTTCAGG GGCTCCATCT TGTTGGGTGT
CCCTGCCTTG TTGTACCTCT TCTTCTTTGC AGTTCATTTC CAGGTGTTGA GCAAGGAAGG
TGATGGTTCT GCTTTCATGT CCAGTGCCTT CAGAGCCGGC TTGGAAGGCA ACAGCATTCC
CAAGAATATT ATTGCTCAAG TGGGTTTAGG TTCGACTGTA ACAATTCGTC ACATCGACAC
TCAAGGTGGC TATTTGCACT CGCACGAACA CTACTATCCT GCTGGTTCCA AACAGCAACA
GATTACGTTA TACCCCCATT TGGACTCCAA CAACAAATGG TTCATCGAAC CATACAGCAA
CCTCACTGTG TACAATGAAA CGTTTGTGCC TTTGACAGAT GGTATGAAGG TAAGATTAAA
GCACATCAAT TCAGGCAAGA GATTGCACTC TCACGATGAA AAGCCTCCTG TCAGTGAACG
TGACTGGCAG AAGGAAGCTT CTTGTTACGG GTTCGAAGGA TTTGCCGGTG ACGCCAATGA
CGACTGGGTT GTAGAAATCG TAAGCCACAG GACCCCAGAG GGCGAAGCCC GCAATAACGT
GATCGCCTTA ACATCTGTAA TCAGATTCAG ACACGCCATG TCTGGACACT ATTTGTTCTC
GTCGGAAGTC AAATTGCCAG AATGGGGTTT TGGCCAACAA GAAGTCTCTG CTGCCTCGTC
TGGTAGAAGA GCATTGACCC ACTGGTATAT CGAGACTAAT GAAAATCCTA TGTTGAGCCA
GAGTGAAGCC AGGATCATCA ACTATCCTAA GTTAACGTTG TTGCAGAAGT TCACTGAGTC
CCACAAGCGC ATGTGGAAGA TCAACCAGGG CTTAACCGAT CACCATAACT GGCAGTCTGA
ACCCCAAGAA TGGCCATTGA TGTTGAGAGG TATTAACTAC TGGGTCAGAG AACACAGACA
AGTATATTTG ATGGGTAATG CCGTGACCTG GTGGACTGTC TCGTCTGTTA TTGCTGTTTT
CTTCTTGTAC ACTGCCATTC AAGCTATCAG ATGGCACACT GGTAGTCAAA TTGCGACTGA
CAAGAATGTT TACAACTTCA ATTTCCAAGC CTTTTCATAC ATATTGGGTT GGGGTCTTCA
TTACCTCCCA TTCTTCATTA TGGGTAGACA ATTGTTCTTG CATCACTACT TGCCAGCTCT
TTACTTTGGT ATCTTGGCTC TCGGACACTT CCTTGAACTT TTTACTGGTT ACTTCTTGGC
CCGCTCCCAA TTCTTACAAA GATTCGGCTT GGGCTTGGTC ACCATCTTTG TTGCTCTCAG
CGCTGTTTTC TACATCAATT ACTCTCCTTT GATTTATGCC ACCAACTGGA CCAAAGACCA
GTGTAAGAGA TCTAAGGCCA TCAGTACTTG GGACTTTGAC TGTAACACCT TCCACGGAAA
CATCAGCGAG TACAGCATCG ACGAAGCTGC TCTGCTTACA AGTGCTAGCA AGATTGCTGA
CGATCTTCTC AAAAAGGTAG AAGAAGCTCA CGAGACGCCT GGTGAACTCT TGCAACAGAA
GAAGCCAGTT GATCCAGAAG AAGAACAAAA GCATCTCTCT CAGGATGGAG AAAAGAAGGC
TGAAGAATCT CCAAAGCAAG GTGATGACAG TTTGCCTGTA GTTGAAGATG TTGTTGTCGA
AGACGTTGTA TTGGAAGAAG CTGTTCTTGT AGAGGAGCCA ATTGCTCCAC CTATTCTTGA
CGATGAAACC CCTGTTGCCG AAGCACAAAT CCCAGAAGAA GTAGAAAGCT CTCAGGAAGC
TGAACCTGTC CAAGATGTCG CTGAAGAAGT GGCTGAACCA GTTCAACAAG TCCTCAAGGT
TGAAGAACCG GCTGCTGAAG ACCCAGTAGC AGAGCCAGTA GAGGAAGTTG TAGAAGTTAT
TGATGTTTCT GCACAATAGA CTCCGTTCGA AGTTGATTTC TAGTTACTAC ACTGGTGCAA
CGTTGATAGG TGTTTATAGA TGATAGCATT AGTGAGTATG CTCTCAAAAT CCAATTACTC
TTATAAATAT AAGCAATTCG TAATTAGTGC ATTACAACGT AAAAACTGAC TAGCTATATA
CACAAAAGGA ACCATTACAA CTTC
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| Protein sequence | MAKKQSSAAK AAALKAKQAP SLLSVDPVVD PVFAQGAIRS YLVTDPAPTL LKKRSLLGSN
EWILIAVLLV ASYYVRMYNL SYPKSVVFDE VHFGGFARKY ILGKYFMDVH PPLAKMLFAA
VASYGGFKGD FEFKSIGDYF PEGTPYVLMR QFPALLGIGT VLLAYFTLRS SGVRPVIAFA
TSFLLLVENS NVTISRYILL DSPLLFFIAA SIFAWKKFEI QTPFSAGWFK SLIATGVALG
LALSSKWVGL FTVAWVGLSC VYQMWFIVGD LSVSAKKVVA HAFFRGSILL GVPALLYLFF
FAVHFQVLSK EGDGSAFMSS AFRAGLEGNS IPKNIIAQVG LGSTVTIRHI DTQGGYLHSH
EHYYPAGSKQ QQITLYPHLD SNNKWFIEPY SNLTVYNETF VPLTDGMKVR LKHINSGKRL
HSHDEKPPVS ERDWQKEASC YGFEGFAGDA NDDWVVEIVS HRTPEGEARN NVIALTSVIR
FRHAMSGHYL FSSEVKLPEW GFGQQEVSAA SSGRRALTHW YIETNENPML SQSEARIINY
PKLTLLQKFT ESHKRMWKIN QGLTDHHNWQ SEPQEWPLML RGINYWVREH RQVYLMGNAV
TWWTVSSVIA VFFLYTAIQA IRWHTGSQIA TDKNVYNFNF QAFSYILGWG LHYLPFFIMG
RQLFLHHYLP ALYFGILALG HFLELFTGYF LARSQFLQRF GLGLVTIFVA LSAVFYINYS
PLIYATNWTK DQCKRSKAIS TWDFDCNTFH GNISEYSIDE AASLTSASKI ADDLLKKVEE
AHETPVAEPV QQVLKVEEPA AEDPVAEPVE EVVEVIDVSA Q
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