Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_62621 |
Symbol | |
ID | 4840173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 1066540 |
End bp | 1067469 |
Gene Length | 930 bp |
Protein Length | 310 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640391488 |
Product | predicted protein |
Protein accession | XP_001385560 |
Protein GI | 150866083 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.15027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.247728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTCGCTGTTA TCGATAGATA CACTGTCTTG TTGAAGGATG GTGAGACAAC TGCTACCATT TATCCCATCC ATACGACAAA TGAACTTCCA CCAGGATTGC TTGCGTTTTT ATGTGACGAG TTCAATATGG AAATTGAAAG AGGTGAGACT TCCAGCTTTT TTGATACTCT TCATATTGAG CAGTTCCAAA ATTATTGGTT TGGAGCTTTC GCTGCCGTAA TGGTGTTAGG AGATTCTCCG GCTCTAGAGG GTTCTAGACA ATGGGAAAAG GAGTGTTTGG GTACCTTTTT CATCAAGCCC AACTATCCAG GCCGGTGTTC ACACATTTGC ACGGGAAACT TCTTGGTTAA TGCTGGGATT CGTGGCAAAG GCATTGGTAG AACGCTCACA GACTGCTATT TGCAATGGGC ACCTAGACTC GGATACACCT ATTCTATATT TAACTTAGTT TTTGAAACGA ATGTGGCAGC TCGTAGCATT TGGGAGTCAC TTAATTTCAA GAGAATCGGC CGTGTCAAGC TGGCTGGTAT TCTTAAGGGT CATGAACAGG CTGTGGATGC CATTATGTAT GGAAGAGAAT TGATCAACAC CTCGGATCCC GCCGTTGGTG CTTATCGGTT TGACAAGATC AAGTTCTACT TGGAAACTGG CAGATATCCA GCGATGGCTG ATCGTCAGGA GAAGTCTCGA TTACGTTCCT CGGCTTCCCA TTATCGATTG GAGAATGGAA AGTTGATGCT TAAGGGTCGA GAAGTTGTGA GTAATCCTGT AAGACAGTTA CAGATCTGCA CCGAAGTCCA CTTGTCGAAC CACGGAGGCA TCAACAAGAC AACATCCATT GTGACAGAGA AGTACCACTG GACAAGAATA AAAGACACTG TAGCCACTGC CATTAAGAAT TGTGCCGAAT GCAGAGATCC TTCTCGCGAC
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Protein sequence | VAVIDRYTVL LKDGETTATI YPIHTTNELP PGLLAFLCDE FNMEIERGET SSFFDTLHIE QFQNYWFGAF AAVMVLGDSP ALEGSRQWEK ECLGTFFIKP NYPGRCSHIC TGNFLVNAGI RGKGIGRTLT DCYLQWAPRL GYTYSIFNLV FETNVAARSI WESLNFKRIG RVKSAGILKG HEQAVDAIMY GRELINTSDP AVGAYRFDKI KFYLETGRYP AMADRQEKSR LRSSASHYRL ENGKLMLKGR EVVSNPVRQL QICTEVHLSN HGGINKTTSI VTEKYHWTRI KDTVATAIKN CAECRDPSRD
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