Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_62569 |
Symbol | ORC1 |
ID | 4839754 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 477115 |
End bp | 479757 |
Gene Length | 2643 bp |
Protein Length | 795 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640391069 |
Product | Origin recognition complex, subunit 1 |
Protein accession | XP_001385440 |
Protein GI | 150865995 |
COG category | [L] Replication, recombination and repair [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1474] Cdc6-related protein, AAA superfamily ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.605443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCGA ATCAGAAAGA ACTTGAAGCG TACAATTTTG TACTCGAGCT GGTGTCTGTT GATGGATCTG CAAGCTCTGC TTCCACGACC AGAAGATCCA GACGTGATAA GTCTACAGCC CTGCCAGTAC TCCTGCTCAG AAGAGAAACC GATGGAATGG TGCTAAGAAC CGGTGATACC ATCTTGGTTC AACAAAAAGG AGCAGACAAG CCTGAAGTTG CCTTCATCAA AGAAATCAAA TATGGGATAG TGAACTTCAT AGAAATAGTA GTCACATGGT TCATACGCAT GGAAGATATT GTGTTTGAAG ACCTTCCAAA AGTTCTAGAA TATGCCGATA AAAGCAAACT TAACACGAAC GAATTGTTCT TGACAGTCTA TTTGGAAGAG ATTTTCGTAT CAGAAATCGT TGAAAAGGTC AACGTGTTGT CGTATCATGA GTTCGAAGAC ATAATCATAG ACGATTCCAA TGCTTCCAAT ACATTCATGG CTAGGCGTGC CTGTAGTTCT GAAGGTGACA ATATCACTGA AGAAATCAAT TACAGAGACT TGTGTGTATT ATTTGAAAAT GACCCGAATG CATTTGTGGA CTTCTTAGGG GAGGCAACAG AAACTGTTCA GAGAACTAAA ACACCCAAAC AAACCCCTCA ACTTAAAAAG GTTAAAACGA ATGCGGAATT GACGTTAGAG AAAAACGTCA CAGACGAAGA GGATGATGAA GAAAAGGAAA TAATCAGCAC AGATAAAGGT GGCGAAAGTC TGTCTGTGGC AAAAAGAGGA ACGAGAAGAA CAAGGACTAC TGAGACGAAA CGAACAAAGA AATCTCCTAA AAAAGGGTCT CCGCAGAGAA AATCTCCCAA AAAAATTAAT ATTACTGTAG AAAGTGAGGA AATTGAGGAA GAAGAAATTG TTGAGAAAGA CGAAGTCGAA CAGATCCAAG ATTCTCAAGA TGCCAAAGTG ATAAATCATG GTGACAACGA CGAATACATA AAAGAACAAA ACGGTGACGA AAGCTCAGAT GAGGACGATC TTTCAGCGTC AGCATCAGAC GATCTCGACT CAGATGAGGC TGAAGTCTCA GAGTCGGATG AAGAATTCCA GGTTGAGACT ACAAGAAAAC GACCAACAAG ACAGCAAAAG AGAATTGTGA CTCCAAGTAG GACCAAGTCA CCTGCTAAGA AACCAAGGCT TACAAAGCAA GAGAAGATCA AAGAGTTCAT GGATGGTGTG TTGGCTCTGC CAAGCTCGAA CCCAAGGCAA AAGTTCAAGG TTCGTACATC TCCCAAGAAA CAGACCAATA TATTATCCTC TCTCAAGATA CAGAAGACTT CTGGAAATTT TATAAAAAAC CTTGATACTA GCTCAAAGGC TTTTAAAGAA ATAAAGGAGA AATTGCACTC TTCACAGGCA ATATCGCACC TTATTGGTAG AGAAGAGCAG TTTGCCTCGA TTTATGTCAG CTTGATGAAT GCCATAGAGC AAGAAACAGG TTGTTCTATT TATGTATGCG GAACTCCAGG AGTTGGCAAA ACTGCCGTAG TAAGAGCAGT AATTAACCAA TTGAAAGAAG ATTTCACGAA TGGATTTGAT TATTTGGAGA TCAATGGATT GAAGTTGCTA TCTCCTGCTG TTGCCTATGA ACAACTTTGG GAAAAGATTA GCGGAGTGAA AGTTACAGCT GCCAATGCAG CCTTGTTCTT GGAGAACTAT TTCAAGAATG ACGCGAAGAG AAAGCCTCTT GTTGTAGTTA TGGACGAATT GGACCAGATT GTTACGCAGA AACAGAACGT GATGTATAAT TTCTTCAACT GGCCCACTTA CGCTTCGTCT AAATTGATTG TCATTGCTAT CGCAAACACT TTGGATTTAC CAGAACGTGT TCTTTCCAAC AAAATTTCAT CTAGACTTGG ATTAGCAAGA GTCGAATTCC ATGCCTATTC CTACGATCAG TTGGGCGAAA TCATTGCACA AAGGCTCAAG ATGCTTACCG AGCAAAGCAA ACAGAAAGTA GCAATCAAAG ATGATGCAGT TGGTTTTGCT TCAAGAAACG TTTCCAGAGT TAGAGGAGAT GCCAGAAGAG TGTTACTGAT ATGCAGAAGA GCAGTGGAAA TTGCCGAACA GGAGTATATT GAAAAAAAGA ATGAAAAGCT TGTTGCAGAA GATGAGATTT ACAATGTCCA GATCCCTCAC ATTGCCAAAG CAATTAACGA ATCGATCAAT TCACCCTTGG CAAAGTATTT GGAGCTGCTA CCATTTGGCT CGAAATTGCT TCTCGTTGCC GTAGTGTTGC GAATGAGAAG ATCGGGACTT GGAGAAAACA GTCTCGGCGA TGTCATCGAT GAAATGAAGC AAACTTTGCA GATGTTCACT AGTCAAGATA GCACTCTGTT GTTAAAAGAA TCTGAACCAA ATGTTACTCT CTCCAATTTT CTCTATGCTA GTGACATATT TGATCTCTCT AATGGAGTCC CAGATGTTAG AATTAGCCAT TTTAAACGTA TTCTCAATGA GCTCGTCGAA GGTGGAGTGT TGACACAGCA AAATATTCCA GGGGAGAGAT ACAGACAAAT CAGACTTCAT GTTTCTCAAG AGGAAGTTGT TTCAGTTCTA AAGAGAGACA ATAGCATAGC TGGAATGATA TGA
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Protein sequence | MASNQKELEA YNFVLESVSV DGSASSASTT RRSRRDKSTA SPVLSLRRET DGMVLRTGDT ILVQQKGADK PEVAFIKEIK YGIVNFIEIV VTWFIRMEDI VFEDLPKVLE YADKSKLNTN ELFLTVYLEE IFVSEIVEKV NVLSYHEFED IIIDDSNASN TFMARRACSS EGDNITEEIN YRDLCVLFEN DPNAFVDFLG EATETVQRTK TPKQTPQLKK KDEVEQIQDS QDAKVINHGD NDEYIKEQNG DESSDEDDLS ASASDDLDSD EAEVSESDEE FQVETTRKRP TRQQKRIVTP SRTKSPAKKP RLTKQEKIKE FMDGVLASPS SNPRQKFKVR TSPKKQTNIL SSLKIQKTSG NFIKNLDTSS KAFKEIKEKL HSSQAISHLI GREEQFASIY VSLMNAIEQE TGCSIYVCGT PGVGKTAVVR AVINQLKEDF TNGFDYLEIN GLKLLSPAVA YEQLWEKISG VKVTAANAAL FLENYFKNDA KRKPLVVVMD ELDQIVTQKQ NVMYNFFNWP TYASSKLIVI AIANTLDLPE RVLSNKISSR LGLARVEFHA YSYDQLGEII AQRLKMLTEQ SKQKVAIKDD AVGFASRNVS RVRGDARRVL SICRRAVEIA EQEYIEKKNE KLVAEDEIYN VQIPHIAKAI NESINSPLAK YLESLPFGSK LLLVAVVLRM RRSGLGENSL GDVIDEMKQT LQMFTSQDST SLLKESEPNV TLSNFLYASD IFDLSNGVPD VRISHFKRIL NELVEGGVLT QQNIPGERYR QIRLHVSQEE VVSVLKRDNS IAGMI
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