| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_62322 |
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| Symbol | DQD1 |
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| ID | 4840232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1534441 |
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| End bp | 1534881 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640391547 |
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| Product | 3-dehydroquinate dehydratase 1 (3-dehydroquinase 1) (Type II DHQase 1) |
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| Protein accession | XP_001385998 |
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| Protein GI | 126138950 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
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| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTAAGA AAGTGTTGTT GATCAACGGC CCCAACTTGA ACTTGTTGGG AACCAGAGAG
CCTGAAAAAT ATGGAACGAC CTCATTGAAA GATATTGAAC AGGCGGCTCA GAACCAGGCT
ACTGCCAAAC AAGATGGCTC TGAAGTGTTG GTTTACCAGA ACAACACCGA AGGTTTCATT
ATCGATCGTA TCCACCTCGC CAAGCAAGAG GGTGTAGGAT TCATAATAAT AAATGCTGGA
GCTTATACTC ACACGTCAGT GGGTATAAGG GATGCCCTTT TGGGAACAGC CATTCCATTT
ATCGAAGTGC ACATTACTAA TGTCCACCAG AGAGAACCAT TCAGACACCA GTCTTACTTG
AGCGACAAGG CAGTAGCAGT AATTTGCGGA TTGGGTGTCT ACGGCTACAC TGCTTCCGTA
GAGTACGCCT TGAACTACTA G
|
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| Protein sequence | MVKKVLLING PNLNLLGTRE PEKYGTTSLK DIEQAAQNQA TAKQDGSEVL VYQNNTEGFI
IDRIHLAKQE GVGFIIINAG AYTHTSVGIR DALLGTAIPF IEVHITNVHQ REPFRHQSYL
SDKAVAVICG LGVYGYTASV EYALNY
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