Gene PICST_61692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_61692 
Symbol 
ID4840073 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp337312 
End bp338136 
Gene Length825 bp 
Protein Length208 aa 
Translation table12 
GC content42% 
IMG OID640391388 
Productpredicted protein 
Protein accessionXP_001385752 
Protein GI150866229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.320803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00450301 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCGTGGT TTTGTTCTAT TACGCTCATG GCTCTCGTTA TTGCCTACGT AAATGCAACT 
CCTCCAGCAT GTTTCCTTAG CTGTATTGCT GAAGTTGCCA AAACATGTCC TCTCCAGAAA
ATGGATATCA CTTGTCTTTG TGCCAAAGAA GATTCTGTTC TTGGCTGTAT GGTTGATATC
TGTCCATATG GAACATTCTT CAGTGGAAGA GATCATTTCA TTGGTACTTG TATGGAACAC
GGCAAACCGT CAATTTCAAA CCCTCATCCG CCAGATCCAA TTTACCCGCC AAAATTATCT
TCATCTATTT CTACAAAACC TACTCCAATT TCTTCTTTCA GCCTGACTAT TACCGACGGC
CTGTTAACTA GTGAAAATCT GTTAACTAGT GTTAGCCTTT CAAAACCTGC TAGACTGTCA
ATTGTCAGTC TGTCTACCAC TGTCAGCTTG TCAACCGGAA CAACATCACC ATATTGGACT
TCATGGACAA CTTCGACTAT TTCTTCATTA CCTACTTCGA GAAAAACTTC GATAATCACT
TCGACGATTT CTTCAATCAA GTACAAGCCT TCTATGACTT GGACTACATC TACACAGCAA
CAAATCGAAA CAGGCAAACC TGAATCCGAC TGCGATTCTG ATACAGAGTC CGAAGATGAA
TATAACAGCG ACGAAGATTG TGAATGGGAA GAAACCCAAT CGGTTGATGC TGACGGCAAT
GTTATCTTCA TCAGGAGACC TATCAATGTG CCGCAGAAGT ATCGCAACCC AAAGAACAAC
GGCAAAACCC GAAAGGTTAT CATCAAGAAA CCTCCCCAGG ATTAC
 
Protein sequence
MSWFCSITLM ALVIAYVNAT PPACFLSCIA EVAKTCPLQK MDITCLCAKE DSVLGCMVDI 
CPYGTFFSGR DHFIGTCMEH GKPSISNPHP PDPIYPPKLS SSISTKPTPI SSFSSTITDG
LVSLSKPARS SIQQIETGKP ESDCDSDTES EDEYNSDEDC EWEETQSVDA DGNVIFIRRP
INVPQKYRNP KNNGKTRKVI IKKPPQDY