Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_48821 |
Symbol | |
ID | 4839962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 930683 |
End bp | 931483 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 12 |
GC content | 37% |
IMG OID | 640391277 |
Product | predicted protein |
Protein accession | XP_001385871 |
Protein GI | 126138696 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00127282 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.146555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCAG CTATTAAATT AGACTCTCTT GTCAACTCAT TGGTTGAATC CGCAGCACCA ACAGAATTGC CTTACGTAAG TAAGGATTTG TCCATCTTGT TATCAGGTAG TAATTCCTCG ACGGTGGTTG ATTCGATTGA AGAATTTGTT AATGAGAAAG CAGCGGTCTT TTCTTCTGCA TACATCGCGT CCAAACACAA TAAAGACTCC AGCTCATCGA AGTATATCGA TTTTATTAGC AAAAAGAAAT TCAACATCGA TATCAATACG CAAAGAGCAA TTGACTTTGA ACCATTTTCA CCGCTTGTAG AGTATCCGGA ATACTATAAC GATTTGGTTG AGAAGTTAGG TCAGTATGGT GAAGATCACT ACCCTTCTAC ATTTGTTTTC ACGGTTGTTC CAAAGAGCTC AGATGAGGTG GAAATTATCA TTATTGGACA ACGTTTGAAC CACGAAAACT TCTTTACTGG TCAATGGAAA TCGATCTACA CTATTTCGAA CACGTCAATA AGTGGAGAAG TCTCCTTGGA TATTCATTAC TATGAAGATG GTAACGTTCG CTTGAATTTC AATAAAGCTG TTAAAGAAAA CTTGAGTTCT GCAAACGCAA GTGCAATTAT CAATGCTATA AACGATTTGG AAAACAAGAT CACTATGCAA ATAGTGGAAA ACTTTAATGA CTTAAATCAA AAGTACTTCA AGAACTTAAG AAGATTATTG CCAGTGACAA GATCAAAGAT AAACTGGGGT AGTGCAATTG GTAACTATAG GTTAGGATCT GATGTCGTTC ACAAAAAGTA G
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Protein sequence | MSSAIKLDSL VNSLVESAAP TELPYVSKDL SILLSGSNSS TVVDSIEEFV NEKAAVFSSA YIASKHNKDS SSSKYIDFIS KKKFNIDINT QRAIDFEPFS PLVEYPEYYN DLVEKLGQYG EDHYPSTFVF TVVPKSSDEV EIIIIGQRLN HENFFTGQWK SIYTISNTSI SGEVSLDIHY YEDGNVRLNF NKAVKENLSS ANASAIINAI NDLENKITMQ IVENFNDLNQ KYFKNLRRLL PVTRSKINWG SAIGNYRLGS DVVHKK
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