| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36800 |
|---|
| Symbol | COM1 |
|---|
| ID | 4839808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | - |
|---|
| Start bp | 1328526 |
|---|
| End bp | 1329290 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640391123 |
|---|
| Product | catechol o- methyltransferase |
|---|
| Protein accession | XP_001385950 |
|---|
| Protein GI | 150866373 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4122] Predicted O-methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.19836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAA AGGAACAGAA GGTGCTCCAG CACATCTTAT CTTTGCCAGA GGATAGGCTC
AAGCAAATCC GCGGTAAACC TCAGGAAGTA CTTAAGCTCA TTGATGACTT TAGCGAAAAT
GTTGAGTCAT TGATGAATAT CGGCCCCTAC AAGGGCAAAC TTATTGTTGA CAAAATCAAG
GAGAAGAAGC CCAAGATCAT GGTAGAATTG GGAGGCTATG TTGGATACTC GGCTATTTTG
TTTGGTAGTA GTTTACCAGA CGATCCTTCG CTGCACTACT ATAGTTTGGA ACTCAACGAG
GAGTTTGCCA ATATCTCCCG TCAGCTTATA GATCTAGCTG GGTTGCTGCA TAGAGTGTCG
ATCATTGTAG GTAAGGCGTC GAGCTCACTT GTAGAAATGG TAGATCATTT TGAAGAGGGC
AATAAAGGCT ACTTTTCGTT TGACTTCATC TTCATCGACC ATTGGAAGGA TATGTATGTT
CCTGATCTCC GTGTGCTTGA GTCGCTTACA TTGATATCAC CAGGTACCAT TATTGTAGCC
GACAATATCT ACTACCCGGG AGCTCCTGAT TATGTTAAGT ATATCCAGGG CCTGCCAGAG
GAGAGAAGGG ACCATAATTA CACAGTTACC AACGTTGCAG CTCCAGAATT CCAGGGCAGG
TGGAATATAC TTTACAAATC CGAGACGATT CCAGTCAAGA ATCCCAAATC GGGAACCGAA
GATGCCATTG AGGTAACCGA ATGCGTGGAA TACCTCAATG GTTAG
|
|---|
| Protein sequence | MPEKEQKVLQ HILSLPEDRL KQIRGKPQEV LKLIDDFSEN VESLMNIGPY KGKLIVDKIK
EKKPKIMVEL GGYVGYSAIL FGSSLPDDPS SHYYSLELNE EFANISRQLI DLAGLSHRVS
IIVGKASSSL VEMVDHFEEG NKGYFSFDFI FIDHWKDMYV PDLRVLESLT LISPGTIIVA
DNIYYPGAPD YVKYIQGSPE ERRDHNYTVT NVAAPEFQGR WNILYKSETI PVKNPKSGTE
DAIEVTECVE YLNG
|
|---|
| |