Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_21007 |
Symbol | |
ID | 4840105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 142039 |
End bp | 142587 |
Gene Length | 549 bp |
Protein Length | 183 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640391420 |
Product | predicted protein |
Protein accession | XP_001385721 |
Protein GI | 150866208 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTTCCACACT TTCCCGAAGA TATAAAGGGT GTAGATGAAA ACGCCTATTC TTTATTATAC AAGAACAAAG TTCAAAAACC TATGCCAGTA CTTATGTCAA ACGAATTTTT CAGTCTTATC TTCTTTCCAA GTGACCACTT CGTGTCTTCC TACAGAAAAT CGAACATTTC TTATACATTT ACCAACTATG GACCACTGAA GTTGAATAGT CAAGTTTTGG AAAAGGCCAT TAACAGCTAC AAAGGCAAAT ACCGATCTAC TACATTTTTC CAAGAGAATC TTCAGCCTTT CACAACGGCA GTCGGGAGAT CCAACAATAG AAAATTAATG AAGCGGTGTC TTTTCAATGC CTTGTGTGAT CAGGTTAAGA CTCAAGATCA ACTAGTGAGT GTTTCTGGAA TCTTCAGGTT TAGATTTCTT CTGGTTCCTG TAACAGATAA GGACAAATCA AAGGTACAGC GTGATATCAG CAATTCTGTT AACAGAATAC TAGAAGATCG AATGTACCGA CTGCTCCTAA GTAGTGGTAC TAAAAAGAGT AATCAAGCA
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Protein sequence | LPHFPEDIKG VDENAYSLLY KNKVQKPMPV LMSNEFFSLI FFPSDHFVSS YRKSNISYTF TNYGPSKLNS QVLEKAINSY KGKYRSTTFF QENLQPFTTA VGRSNNRKLM KRCLFNALCD QVKTQDQLVS VSGIFRFRFL SVPVTDKDKS KVQRDISNSV NRILEDRMYR SLLSSGTKKS NQA
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