Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_12169 |
Symbol | |
ID | 4840189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 581701 |
End bp | 582861 |
Gene Length | 1161 bp |
Protein Length | 387 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640391504 |
Product | predicted protein |
Protein accession | XP_001385458 |
Protein GI | 150866006 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.68712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.32837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTACT CTTCTGAAGT GAACAAACTT CTTGCAGACG GCTCGCGGGC GTACTCGAGC AAGAACTACG AGCTTGCCTC CGAGAAATAC GGAGAAGCAT GTGAGAAGTA CAGTGACGAA AAAGGAGACG AAGATGCTGA TTTGCTTTTC TTATACGGCA AGTCATTGTT CCAGAATGCT GTTCTGAAGT CAGAAGTTTT TGGAGGACAA CCAGGCGACG ATGAACAGGA GGAAGACGAT AAAGAGGAAG AGAATGAGGA GAACAAAGAA GATGGCGATA AGTTCCAGTT CTTTGATGTG GCCCCAGTAG CTGAAGAAGA AGGAGAAGAT GGAGCACCAC AAGATGAAGA AGAGGAAGCA GATGAAGAAA ATGCAGGGGA GGTGGATCAA GAAGAACAGG AAGAAAGTAA TGGTAAGGAA AAGCACGATA AAGAAAATGA GGAAGAGCAG AGTGATTTTG AACTTGCATG GGAAATGTTT GACATCACCA GAAACCTCCT TGAGGCGAAA TTACAAGATA TTGAAGAACA AGGCAAAGAT TTGACAGTTC CATATCTCAA GACAGATGAC GAAGAAACAG ATAATCAGTA TATTATCTTG ACGAAGAAAT TATCTGAAAC ATATGACTTG CTAGGAGAAG TATCTTTGGA GTCAGAGAAC TTCCCTCAAT CTGCACAGGA TTTAAAGAGC AGTTTGCAAC TTCGTCTTAA GCTCTACAAC CCAGAGACAT CGGCTCTAAT TTCCGAGTCA CACTACAAAT TATCGCTTGC TCTTGAGTTT TGTGTCGAAG ACCCAACTCT GCGTCAAAGT GCCGTTGAGC ATATGAAGTT GGCTATTGAC TCTGTTAAGA AGAGAAACGA ATCCGAAACA GATGCCCTGA AAAAGAAAGA AAACGAAGAG TTGATCCAGG ACTTGGATGC AAGATACCAG GAGTTGAAGA GAGACCCTAC AGAAGAGCTC AAGAGCGAAC AGTTGGATAT CATCAAGGGT ATCTTGGGTG AGCCTACTGC TGACGGCGCA GGCTCCAGTG GATCTGCTGC TGCGTTAGTC AACGATCTAA GTGGCATCGT CAAGAAAAAG AAGGTAGCCC AGGTCAATGA CTTGAGTGCT GTGGTTAAGA AGCGAAAAGC TCCAGGAAAG ATCTCCGGGT CCGAAAAGAA G
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Protein sequence | MSYSSEVNKL LADGSRAYSS KNYELASEKY GEACEKYSDE KGDEDADLLF LYGKSLFQNA VSKSEVFGGQ PGDDEQEEDD KEEENEENKE DGDKFQFFDV APVAEEEGED GAPQDEEEEA DEENAGEVDQ EEQEESNGKE KHDKENEEEQ SDFELAWEMF DITRNLLEAK LQDIEEQGKD LTVPYLKTDD EETDNQYIIL TKKLSETYDL LGEVSLESEN FPQSAQDLKS SLQLRLKLYN PETSALISES HYKLSLALEF CVEDPTSRQS AVEHMKLAID SVKKRNESET DASKKKENEE LIQDLDARYQ ELKRDPTEEL KSEQLDIIKG ILGEPTADGA GSSGSAAALV NDLSGIVKKK KVAQVNDLSA VVKKRKAPGK ISGSEKK
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