| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89936 |
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| Symbol | |
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| ID | 4839328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1214569 |
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| End bp | 1216977 |
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| Gene Length | 2409 bp |
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| Protein Length | 793 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390643 |
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| Product | predicted protein |
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| Protein accession | XP_001385241 |
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| Protein GI | 150865856 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.731556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.295472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GACCCTCTTA ATCATCTTTT CGCTGCAATG AATACAGAGA ATCAGGATCA AGATGAATCC
GAGAGCTTCA AGTTCTTTGG GCTTGGTGGA TGTAATGAAG TGGGTCGTTC GTGTCACATA
ATTGAGTACA AGAATAAAGT GATTATGCTA GATGCTGGGG TCCATCCAGC ACTCACAGGA
CATTCCTCTT TTCCATTTTA TGACGAATAC GATTTATCAA AGGTAGACAT TTTGCTCATT
AGTCATTTTC ACTTGGACCA TGCTGCTTCA TTGCCTTATG TGATGCAACA TACTACTTTT
AAAGGTAGAG TATTCATGAC CCACGCAACC AAGGCTATCT ACAGATGGCT TCTTCAGGAT
TTCGTTAGAG TGACGTCTAT CGGAGCGGGT TCACGTGCTG AAGGATCAGA CGAGACGTCA
ACCAATTTGT ATACGGACGA TGATATCATT TCGTCATTCG ACAGAATCGA AACTATAGAC
TACCATTCCA CTATGGAAAT AGACGGTATA AGATTCACAG CGTACCATGC TGGACATGTT
TTGGGTGCGT GTATGTATTT TGTTGAAATT GGTGGTCTCA AAGTTCTATT CACAGGTGAC
TACTCCCGTG AAGAAAACAG ACATTTACAT GCTGCTGAAG TGCCTCCTAC CAGACCCGAT
ATCCTTATAA CGGAATCAAC TTTTGGAACT GGTACATTAG AACCAAAGGC CGATTTGGAG
AAGAGATTGG TCCAGAATAT ACATGCCACA CTCACCAAGG GTGGACGAGT CTTGATGCCT
GTATTCTCGC TTGGTAATGC TCAAGAGTTA CTATTGATCT TGGACGAGTA CTGGGAAAAA
AACGAAGACC TTCAGAACAT AAGCGTATTC TTTGCCTCTA AATTAGCAAG GAAGTGTATG
GCTGTCTATC AAACATATAC CAGTATCATG AACGACAATA TCAGACTCTC GTCGAGAATT
GGGCAGAAGT CTAGTCCCTT TGATTTCAAA TATATTAAGT CAATCAAGGA TTTAGGGAAG
TTTCTGGACA TGGGTCCGTC TGTTGTCGTA GCATCTCCAG GGATGTTGCA AGCAGGTGTT
TCCAGGCAAT TGTTAGAGAA ATGGGCTCCC GATCCCAAAA ACTTGGTTGT AATGACTGGT
TATTCTGTAG AAGGTACCAT GGCCAAAGAT TTGTTGAATG AACCACATAC CATCAAGTCG
GCAGTAAACC CTGATATCAC AATTCCAAGA AGAATAAACG TCAGCGAGAT TTCATTCGCT
GCTCACGTCG ATTTCCAGCA GAATTCAGAA TTCATAGAAA AAGTTGCTCC TCTGAAGATC
ATCTTGGTTC ACGGCGACTC TGTTCCTATG GGTAGATTGA AGTCTGCATT GTTGAGTAAG
TATTCTGCTA GAAAGGGAAC TGAGCAAGAA GTTAAAGTAT TTAATCCTAA GAACTGTGAG
CCGCTCAAGA TCCCCATTAA GGGACTTAGG GTTGCAGCTC GGGTGCTAGG TACGCTTGCA
GAAGAGCAAT TACACTTGTT GAAGGCCGAA ATCGAAAACA AAGTAGCAGA AAGCAATTTG
AAGATAGAAG AACTTGATGA CGAAGAAAAT GAAAAAATGG AAATAGGACA GCCTAAGGAA
GAAGGCAAAG AAGATGACAG CAAGGTCAAA GAAGGTGAAG ATACGAAGAC GGAAAATGAG
GATCCCGATG CGTTCAAGAC AGGACAATTG ATGTCTGGTG TATTGGTATC TATGGATTTC
GACTTGGATC TTTTACAGCT ACAGGATTTA CACGAATACA CTCAATTATC TACGTCTATA
GTCAAGTCGA AGATGTCATT AAAGATCAAC GCCGACATCA CATTGATGAA ATGGCACTTG
GAACAGATGT TTGGGTTTAT CAATATTGTC AATGATGATG AAGATGAATG GGAATGTATA
ATTATGGATA TGATAGATCT CTTGGTGGAC AGATCCAAGA CGGATAGTTT GTACATTACT
TTGGAATGGA TTAACGACAA TTTGATGTCC GATTCGATGG CAGACAGTGT CATTGCAATC
TTGTATTCCA TTGATTCCTC TCCAGCATCT GTCAAGTTGT CCTCTCGTTC ACATAATCAT
AACCACGACA ATATTGAAAA GGAGTCTACT CCACCAACGA AGAAGAGTGC TCACGCAAAC
TCCGAAATAT CCAGTAGAAT TCACCGTATT TCATCATTGT TAAAAGCCCA GTTTGGTGAC
TCGTTGAACA ATTTAGAAGA CAACAAGGCT GTTATCACAA TCGGTAAAAA CGAAGCCAAG
ATAAACTATC TCGATTTGAC TGTCGATTGT GGGTCAAGAG TGTTGAGAGA CCGTATAGAA
AATATCATCA AGAGAGGTTG TGGCCTCGCA GCTCCATTGA GTCAATACCA AGAAGTGTAT
AAAATATGA
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| Protein sequence | MNTENQDQDE SESFKFFGLG GCNEVGRSCH IIEYKNKVIM LDAGVHPALT GHSSFPFYDE
YDLSKVDILL ISHFHLDHAA SLPYVMQHTT FKGRVFMTHA TKAIYRWLLQ DFVRVTSIGA
GSRAEGSDET STNLYTDDDI ISSFDRIETI DYHSTMEIDG IRFTAYHAGH VLGACMYFVE
IGGLKVLFTG DYSREENRHL HAAEVPPTRP DILITESTFG TGTLEPKADL EKRLVQNIHA
TLTKGGRVLM PVFSLGNAQE LLLILDEYWE KNEDLQNISV FFASKLARKC MAVYQTYTSI
MNDNIRLSSR IGQKSSPFDF KYIKSIKDLG KFSDMGPSVV VASPGMLQAG VSRQLLEKWA
PDPKNLVVMT GYSVEGTMAK DLLNEPHTIK SAVNPDITIP RRINVSEISF AAHVDFQQNS
EFIEKVAPSK IILVHGDSVP MGRLKSALLS KYSARKGTEQ EVKVFNPKNC EPLKIPIKGL
RVAARVLGTL AEEQLHLLKA EIENKVAESN LKIEELDDEE NEKMEIGQPK EEGKEDDSKV
KEGEDTKTEN EDPDAFKTGQ LMSGVLVSMD FDLDLLQLQD LHEYTQLSTS IVKSKMSLKI
NADITLMKWH LEQMFGFINI VNDDEDEWEC IIMDMIDLLV DRSKTDSLYI TLEWINDNLM
SDSMADSVIA ILYSIDSSPA SVKLSSRSHN HNHDNIEKES TPPTKKSAHA NSEISSRIHR
ISSLLKAQFG DSLNNLEDNK AVITIGKNEA KINYLDLTVD CGSRVLRDRI ENIIKRGCGL
AAPLSQYQEV YKI
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