| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_72518 |
|---|
| Symbol | ODD1 |
|---|
| ID | 4839372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | + |
|---|
| Start bp | 163966 |
|---|
| End bp | 166234 |
|---|
| Gene Length | 2269 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640390687 |
|---|
| Product | oleate delta-12 desaturase |
|---|
| Protein accession | XP_001384685 |
|---|
| Protein GI | 126136323 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CACTAGTCTC ACAGAGGTGT ATCCTTCCTT TCTGACTTGA AATCTTTGTC GGTCTCGCGG
TCTAGCCTTG TCTGATTTCT GGACTTTCGT TTCGTTCTCC AGTCCCTTTC CCTACTATCT
ACTTAGATTT TTTCTGCCTC TGATCTAATC TGGCAGAGTA TAGACAGTTT GAATTTTTAG
CATTTTCGCC ATGTCTTCGC TTGCTTCATC TGGAACCTCC ACAGGAGCCT CAACCTCGGC
CTCCATCAAC AAGAAGGGCA ATGTTGCCAC CTTGAACACC ACCAAGTTGT CTGCCATCGA
CACCTACGGA AATCAGTTCA ATGTTCCCGA CTACACCATC AAGGACATTT TATCGGCCAT
TCCTTCGCAC TGCTACGAAA GAAGATTGCT CGAGTCCTTC TACTACGTCT TCAGAGACAT
CTTCGCCATG GTCACTCTCG GCTACCTCGC CAACAACTAC ATCCAGTTCT TGCCTAACGT
CTTCCTCAGA ACTGCAGCCT GGGCCGGTTA CATCTGGACC CAAGGTTTGT TTGGTACCGG
TATCTGGGTC TTGGCCCACG AGTGTGGACA CCAGGCCTTC TCCGACTACG GCTGGGTCAA
CGACACCGTT GGCTGGGTGT TGCACTCATA CTTGTTGGTT CCTTACTTCT CATGGAAGTA
CTCCCACTCC AAGCACCACA AGGCTACCGC TCACTTGACA AGAGACATGG TGTTCGTTCC
TAAGAACAAG GAAAGATTCC TTTCTGCCAG AGGTGTCGAA GACTTGGAGG ACTTGGTCGC
TGACTCTCCT ATTTACACAT TGATTTCGTT GTTTGTCCAA CAATCCGTAG GCTGGCTCGG
TTACTTGGTC TCGAACGTGT CCGGTCAACC TTTGGAAGGT ATCTCCAAGT TCAACACTAA
CCACTTTAAC CCTTCGTCTG TCCTCTTTGA AAGAAGAGAC TACTGGTATA TCGTCATCTC
CGACATTGGT ATCTTGATCC AGATGACTGT TCTCTACACC TGGTACAAGA ACTTCGGTGG
CTTCAACATC CTTGTCAACT ACTTCTTGCC TTACTTGTTT GTTAACCACT GGTTGGTGTT
CATCACCTAC TTGCAGCACT CCGACCCAAA GATGCCTCAC TACACTGCTG ACCAATGGAC
TTTCGCCAGA GGGGCTGCTG CCACCATGGA CCGTGAATTC GGTTTTGTCG GTAAGCACAT
TTTCCACGAC ATCATCGAAA CCCACGTCTT GCATCACTAC GTCTCGAGAA TTCCATTCTA
CAATGGTAGA GAAGCCACTA TCGCTATCAA GAAGGTCATG GGTGAACACT ACCAGTACAG
TGACGAAAAC ATGTGGAAAT CTTTGTGGAA ATCTGCCAGA GCCTGTCAGT TTGTTGACGG
TGACAACGGT GTCATGATGT ACAGAAACGT GAACGGCTTT GGCGTTGACC CAAAGAAGAA
GAACTAAACC CCAAAAATTT AATTGCAACC AATAATTCAA AATTTCGCAG CCAAGGGAAA
TTTTGGATTT TCTTTTTATG GCTAGATTCT CATAGATAGA TATATGATTG ATTATTTGTT
TCACTTCTAT CGTCTATAAA TTCACCTTAA ATTATTTATA CAACTGATCT AATAGTCATC
TACTTACCGT ATGAATGGGA TGCCTGTTCC TGTAACTTCT CGATATTTGA TATAGTCCTG
CTTGAAGAAT TGCACCAAGT AGATCTCTTC AAAGACTATT CTCTTCTTGA AAAAGCTGCC
CAAGATTACA GTACCGAGGA TTGTGACTAT CCAATTATTG AGAAACACTT GTAGCCCTAC
AAACCACCAG AAAAATCCGA AATAGCTTGG GTGCCTCAAA TATCCGTAGA TACCGGTAGT
TACCAACTTG TGAGAGTCTT GTTGATTGCG TTGGATATAA TGGTTGAAAG ATTCACTGGC
AGTATACATC GCGCCAGAAC GACAGAATTG TCCCACAAGT AGAGTAGCTA ATCCCACCAA
AGTGGGTTTG GTCCACGAGT CGATTTGGAA GTAGTATACT CGGATCAAGT ACTCTATTAT
GGCTAGAACG GTCATGGCGT GCATTTCCAT ATCTTCCAAG ATGAACGAGT CGTCGTCTAC
CTGTGCGTTG TTAAACATCA CAGTGAAAAC AAACTCGAGG ATGTGGAATA GAGCGAGGAA
TACGGCGTAC CACGAGAGTT TGATCCATTT GGTCGAACCA TAGAGCACTA TCAAACAGAG
GTTCGTAGAT ATCACTATTC CAAGAAAGAC TGATTTGAGC GAAACAGTA
|
|---|
| Protein sequence | MSSLASSGTS TGASTSASIN KKGNVATLNT TKLSAIDTYG NQFNVPDYTI KDILSAIPSH
CYERRLLESF YYVFRDIFAM VTLGYLANNY IQFLPNVFLR TAAWAGYIWT QGLFGTGIWV
LAHECGHQAF SDYGWVNDTV GWVLHSYLLV PYFSWKYSHS KHHKATAHLT RDMVFVPKNK
ERFLSARGVE DLEDLVADSP IYTLISLFVQ QSVGWLGYLV SNVSGQPLEG ISKFNTNHFN
PSSVLFERRD YWYIVISDIG ILIQMTVLYT WYKNFGGFNI LVNYFLPYLF VNHWLVFITY
LQHSDPKMPH YTADQWTFAR GAAATMDREF GFVGKHIFHD IIETHVLHHY VSRIPFYNGR
EATIAIKKVM GEHYQYSDEN MWKSLWKSAR ACQFVDGDNG VMMYRNVNGF GVDPKKKN
|
|---|
| |