Gene PICST_65748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_65748 
SymbolGIT2 
ID4839255 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp559163 
End bp565816 
Gene Length6654 bp 
Protein Length515 aa 
Translation table12 
GC content41% 
IMG OID640390570 
Productglycerophosphoinositol permease 
Protein accessionXP_001384771 
Protein GI150865520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ACAGAACGGT GAAGGTATCA AAGCGGTGGT ATCTCCAGAG CCATATCCAG GAGTGGAATA 
TATAACTAGG AGAAGATTTC CAACGTTTTC GAAAAGTTTT TCAATTTGAA ACCCATTATC
ATTACGATCA GAATATCTTT TCTACTAACT TCAAGATCTT TTGAGGTTTG AATATTTGTT
TCTGTGCGTC TCTTGTTAGT TTGACATCCA AACCTTGGCA ACTTAATTCT TGTCATTGCT
GAATTCTTGG TTTCTTGGAT TTGCTGCCCT CATTAATATT TTTCTTGCTT GATTCATAAC
TACTCATAAA CGATGTCTTC GAGAGATTTG CCAAAATCCT TCAGCGATCT TGCGTTTGGA
TGGACCAGAC ACTTGGACAA TGAAATTACA ATCAATAAGT CCAGCCAAGA GTTGCTGGAC
AGAGATATGC AACCAGATGA AGTTGAAAAG GAACACAAGG TCAAGATGAA CAACTTGTGG
CCAGCTTTCT GCTCTGGTGC AGGTCTTTTC TCAGATGGTT ACGTTAATAA CTCTATCGGT
ACAGTGTCCA GTGCTTTGAA GACTCTTTAT CCTGTCGAGT ACGGCCAGTC ACATGCAATC
TCCAATGTTT CCTCTATTGT TTTCGTTGGT ACAGTTGTTG GTCAATTAGG TTTCGGTTAC
ATTTCTGACA GAATTGCTAG AAAGGGTGGA ATGATGATCG CCAATGTGTT ATTGATCCTC
TTCACCTTGT TGTGTGCCGT AGCCACCTGG GGAGCCCATG GTTCTGTCGG GGGAATGCTT
GCTGCTTTAA CCGCTTTCAG ATTCTTCTTG GGTATCGCCA TTGGTGCTGA GTACCCAACT
GCATCAGTCA TTGCTTCTGA ATTTGCCAAT CAATTGCCAG CCGGTAAGAG AAACAGATAC
TTTTGTTGGT TCACCAACGC CATGATTGAC TTAGGTTTCG TCGTCTCTGC CTTTGTTCCA
TTGGTTCTCT TGTGGATCTT CTCTCCACGT CACTTGACTG CGGTATGGAG ATTAACACTC
GGTTTGGGTG TCTTCCCTCC TCTTACCCTC TTCTTCTTGA GAATGAAAAT GTCTAATTCT
GAATCTTTCA AGAAGATGAA CATGAATCAC GTTAAGACCT ACCCATACTT TTTGATTCTT
AAGTTTTACT GGTTCAGATT GACCATTGTG TCCTTGATCT GGTTCATCTA TGATTTTTCG
TCTTACTCTT TTGGTATCTA CTCCAGTTTT ATGATTGGTG CTATCATTCC AGACGGGGAC
CTCTACAAGA CTTGGGGTTG GAATGTTGTC TTCAACTTAT TCTATATGCC AGGTGCTTTC
TTGGGTGCCA TTGCTGCAGA TTACTTTGGT CCACGTTTGA CTATTGCTTT TGGAACTGGT
ATGCAAGGTG TCGTTGGTTT CATTATGGCT GCTTTGTACC CAAAATTGAA GCACCATGTT
GGTCCATTTG TTGTTGTCTA CGGTATCTTC TCCACTTTGG GTGAATTTGG TCCTGGTGAT
AACATTGGTT TGTTGGCTGC TAAGACATCT GCTACTCCAA TCAGAGGTCA ATACTACGGT
ATTGCAGCTG CTATTGGTAA GATTGGTGCT TTCGTTGGCA CATATGTTTT CCCAATCATT
ATTGACAATG CTGGAGGTTC GGACACTGAC AGGGGTAACC AGATGCCATT CTACGTTTCC
TCTGCCTTGT GTATTTTCTC TGCTATTTTG GCTCTCTTCT TCTGTCCATC TGTCGGTCAA
GATGCAATCA ATAAGGAAGA TGAAGACTTC AAGGAATTCC TTAAAGCTAA CGGTTACGAT
ATCTCCCAAT TGGGTGACGG TGAAGTTGTT GAAGTCGAAT CCTCTGAATT CGAAGAAGAC
CTCAAATTCA AGAAATCCCC AGTCAACGTT CAAGTTGAAA AAAAGTAATG GTACGTTCGC
TTCTGATACA TTCACTTCTA CGCTGATTAG TTTATATTAT ATAATAATTT GAATATTTTT
AATAATAATG GTATATTTAT TTGCAATTAA TGAACGAAAG AATAGACCAC CATAAATTCT
TGAGTTCTTA GACTTGAGTC ATCATTGTTC TGAAACTTCT GACCTCACGC TTAGCATTAC
TCCGCACCAT TGACAGGTCT ACGGAATGCC CCACAAATTG CGTTTGCCAA AACAAGCAAA
CATTTGTACA ATCGCGTACC TTATGAAAGG ATAGGAATGG GCAACAGAAA ACCGCCTCGG
CTGAAGTTTT AAGTTCACTA AAAGAGCTAT TAAACAATCA CTTCCCTCTT ATAATCCCTT
GTAAAACAAT CCAAATATTA AACGGTCATT CATCACAACT ATTAAGTTGA TAGCATCTTG
AAAACACATT TTTGATATAT TTGATGGAGA CTCTGGTGCC AGGGTTAGCA TATCATCGAT
TTCTGTTAAG CATTTGTTGT CGAATAGGTA GGTCATTGAG CTTGCCCTTT ATTGCCCTTT
ATAGCGTGCG CAGCGACAGA AACACCGCCA ATAAATTGGC TGCATTTACC ATCTCAACTT
CGCTACAAAT CCAACTAAAA TAGTGAGTAG AATCTGCTTA GACTAAGGTT ATCAATTTTA
TATGCTCAAC AAGTTTATAT CGAACAGAGA GATGTAAATT ATCATCAACT AATCCTTTGA
ATTAGAATAT CCCAATATTT TTATTGTAGT ATTGAATTCA TATGCTTTTA GAAGTACCTA
AGAGGAAAGC TTACGTCTAA AAAGAAGAAC TGAATTCGGA AAATTGGTTG CAAATTGATC
AAGATCTAAG ATCTATTTTC GAAAAACGAG AATCCTATTA GATTTCAGCT AGAGCGCATG
GTGAAAGTCT CTGTCTGAAT ATCAGTCATC AGCCAAAGCT ATCATTCTTC CAAACATAGT
ATCCAGAGTT GGAGCGACTG CTTCAGGAAC ATATTGTAGG CAGTGGGTTT AGTGCGAGGC
TTTTCTGTTT GAGATCGACT ATGTGAAAAA TCCTGCTAAA CACTTATCCT GACAAGGTGC
AGAAAGCAGT TACAATCTTA TCCTCTAACC CCAGAATTCA CAATTATGTA CAGGATCGCC
TCATATAGGC AATTAAATGC AACTGACACT AAAACATTGG ATCTGGTCCC TTGAGATTCC
AGCATTGTCA GTTGCAACTA GTCAGTCTCT GGGAGGAGCC TTCGGTGAGG AATACGCTGT
AGATATTATT ACCTACGGTC AATTGGTCCA GCGAATTGGT TTAAAACTTG CTAAATATTT
ATTGCACTAC AATGCGTTTA TCCACCTTCT CCATCTTTTT CAAATCCGCT CGTATTTTTT
GAGTCCGAAT GTTAGCGAAA CTAAAAGTGG AGACGGAGAA TTGAACACCC TAAAAGCAAC
CACTGATCAA TCAAGGCTGT TAATTTAAGC GAGTGGTAAA AACTATTGAA GTGCTGGCTT
ACTAGGATTG CAAAAACCCC TTTAAATAGA GTTATGGCCG TCTCAAAAAG CAGTGGAAAT
TGGTTGTAGA CCTACGCTGT GTTAGAAACA ACCATCATCA AACATGTCTA CCTCCTTCTC
TAGTGACGAT AACAAGCCAC ATGTCACTCA TGTAGACGTT GAATCTGAGT CTTATTCGGA
AGATAGTTCA TCCGAACCAA AGATCTCTCA AGAACACAAG GACTATTTGA TTGCAAGGCA
TGGAACTTTC AATTTGCTGC CTTTGCCATC CATGGACGAT GATGATCCAC TAAACTGGCC
CAACTGGGAC AAGAACTTGC AATTGGGTAT CATTGTATTT CATGGTTTTC TCACAGTGTT
CTATGCTTCC GGAGTAGTAG CCGCTTTTGC CAGGTTGGCT GAAGAACTTG GCCAGCCGTT
GTCCAAGATC AGTTATTTGA CCAGTTCCCA GATCGTAGTA TTAGGTATTG CACCACTATT
TTGGGTTCCA TTTACCAACA GATATGGTAA GCGGAATATA TTAATTTTTA CTTGTTTGAT
GTCAACAGTG TTCAATTTGG TTTGTGTATT CATCACTTCC TACGGACCCA TGATTGCTAT
GAGAGTTCTA GCAGCTTTTT TCTTCTCGGC TGGATTAGCC ATAGGGGGTA TTGTCGTCGG
TGAAACTACT TTCAGTCATC AAAGAGCTTC TAGATCCGGA ATTTGGGGCT TGATGGTCAA
CCTTGGAACT CAGGCTGGAC CTTTGTTCAT GGGCTTTGTT GCTCAACGCC AACCTTCCAA
ATATGTCTTT GTCGTATTCA CTGCTACCAA CTTTGCACTC ATGTTGCTTT ATATATTCTT
TGGTAGAGAG TCCCTTTACA ACTACAATGA CAAGTCAAGA AATGTTACAG GACGATATGC
GCTGCTTATG AACTTCAAAC CTATTATTCC TGAAAGAAGA GTTGATGTTG CAGCCATTTT
TGAACCTGTG AAATTGTTCA AGACCTGGAA AGTGACTGTA GCTGCTGTAG CTTATGGGGT
ATGCTTCATG TTTGACAACG TAGCCACCAA CGTAGAGTTG CCCATTGTTA TGGGACAAAA
ATTCCAGTTG GGGCCGCAGG CAACTGGACT TCAGTTTATA TCATTTATGG TTGGTTCTCT
CCTTGGTGAA CAATGTGGAG GCTGGATGAG TGATAGATTT ATGATATGGG GAAAATCTCG
CAATAAGGGA AAGTCATTCA GATTATGGCT AGGATACCCT GGGTTCATCA CTTCCATTGT
TGGTTTGATA GTGTATGGAT TTCAAATCCA GAAGGCTGTA AGTTGGGATA TCACTCCCTT
GGTAGGTTTG GCCATTTGCT CTTTTGGTAT GCAAGTTGTG ACTACAACAA TGATTGCTTT
CTCTATGGAC ACCAGGCCTT TGATCCAAGA AGATGTAGCT CTTTTCCTCA CTGCTGTGAG
ACAGACGCTT GGCTTCATTG GCCCCTTCTT CTTCCCAAAA ATGTATGATA CACTCAGATT
TGATGGAGCC TATGGTTTAA TGGCTGCATT GATTTTCATT TTCGCCATGG TTCCTGTGGT
GTATCTTCAT ATTGTCGACT CTCGAGACGA CAAAAGAAGT TAGGGAACTG ATACAAAAAT
AAATAGTACT AGCATAATAT CTATTACTAC CATTATGACT CGGCCCGTAG TATTATCCAA
TACATACTCT ATAAACAGAC CCTCCCTATT GTACACTTTA CTATGCAAAA TATGCCGTAA
TTATAGATAT TATTACTAGA TATCATTGAT CAGCTTGACC AGGATATCAC CTAAACCCTT
TCTGGCATCA CGACCACCAG AAGACACATC GGCTCCGAAT CTAGACAACG GCCATATCAC
AGTGACAACT TTCCCCACAA CTAGACCTTG GCTGATGGGG CCAAAGTTGT TTGAGTCTAC
AGAATGAAAT GTGTTATCTC CTTCGACCCA AAGGTGGTTC CGTGGAACTC TAGCTTCATC
TCGAGGATAC GGGGGGTGTT TTGGTTTAAC TGTGTCACCT TGCAATCCTA CTACTCTTTT
GGTCAAAACC TTTTCCGGGT CTGTGGGCGA ACGGAACAAG ATGATGTCAC CTCGGTCGAA
CGAATCGGGT TTCTTGAGGT TGTACTTTCT GACAAGAACA ATGTCATTTG TCGTGGTTTC
AGTTCCCGCG TTAAATGTCG GGGTCATGGA TGAGCCTGTA ATCTGATAAG GCAGAAATAC
ATGATTGGAA AATGAGTATA GAACAGGAAA CCAACTGAGT GTAAGAAGAG TAGTTTTCAC
TCCGTATGGA AGGGACGACA TTTTCTTCAA GGACGGCCGA AACGAGCAAC AATAACTATT
GATGTCAGGT TCTCGGAAAG AACTGTTAAT AGAAGTATAA CTAAAGATTA TATATAAAGG
TTTCCTACTT TCGCATTCTC TTCAAGTACT TCATTAGAAA TCCGCATTTC CCATAGTTAA
AGATCCACAT CATTTTTCCT CAGCACTTCA TATAGATAGA AAATCATACA GTGAAAAATC
GCTACGAGGC TAATACTTTG CAGGCTCTTT ATTCGTACAT ATACTATCAC GATGGCTCCA
CAATCCGGTC TCCTCGACCA GATCCTCTTG GAAGACATAG CTCGTTACTG CCCGCAGCAG
TTCCTAGCCT TCCACACATG TTTGTCCAAA GATGGGGATA ATCCTGAGTC ATGTGTCCAA
GAGCAGTTTC AACTAGCAGG CTGCATCAAG AAAACAGTGC CGTCGTTCCA GAAAATCCAG
ACGGTTTGTG CTGGGAAATT GCAGGCGTAC GAGGCTTGTC TCAGGATGTC GGGAAACGAT
ACCAAAAAGT GTGCCTCGGA CTTGCAACTG TTGCGGGATT GTGCCTTTGG GACGCTTGAA
AAGTGAAAAG CTATATCTTG CATTTCGATA TTGCTGGATG ACTTAACCTA GACTTAACTA
TTTTAGACTT ATGTATAGTA AATTAGATAG AGCTGTATAT ATATAATACT ACACTACTTG
TCGATAGGAC GTCTGTATTT GAATGCTAGG TTTTCGAGCC TGATATTGGA ATTGAAGTTG
TCGGTGATCT TTCTGAGCTC CGGATGGTCC ATATGGGACT CTTCGATCTC GTGTTCGTGA
TGGAGCAACT CGTGTTCAAT GTCTTCCTTG TGCTTTATTA ACACGTCAGG ATCGTTTTGG
GCGTGGTATT TTTTCCAGTG GTGTTCTTCA TACTCGCTTT CAAAGTCTAG ATGA
 
Protein sequence
MSSRDLPKSF SDLAFGWTRH LDNEITINKS SQELSDRDMQ PDEVEKEHKV KMNNLWPAFC 
SGAGLFSDGY VNNSIGTVSS ALKTLYPVEY GQSHAISNVS SIVFVGTVVG QLGFGYISDR
IARKGGMMIA NVLLILFTLL CAVATWGAHG SVGGMLAALT AFRFFLGIAI GAEYPTASVI
ASEFANQLPA GKRNRYFCWF TNAMIDLGFV VSAFVPLVLL WIFSPRHLTA VWRLTLGLGV
FPPLTLFFLR MKMSNSESFK KMNMNHVKTY PYFLILKFYW FRLTIVSLIW FIYDFSSYSF
GIYSSFMIGA IIPDGDLYKT WGWNVVFNLF YMPGAFLGAI AADYFGPRLT IAFGTGMQGV
VGFIMAALYP KLKHHVGPFV VVYGIFSTLG EFGPGDNIGL LAAKTSATPI RGQYYGIAAA
IGKIGAFVGT YVFPIIIDNA GGSDTDRGNQ MPFYVSSALC IFSAILALFF CPSVGQDAIN
KEDEDFKEFL KANGYDISQL GDDMWCSSYS LSKSR