Gene PICST_61259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_61259 
Symbol 
ID4839344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp442144 
End bp442563 
Gene Length420 bp 
Protein Length139 aa 
Translation table12 
GC content42% 
IMG OID640390659 
Productpredicted protein 
Protein accessionXP_001385095 
Protein GI126137143 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0089] Ribosomal protein L23 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ACTACTAAAG CTTCTGCTGC TAAGAAGGCT GTTTTGAAGG GTACCAACGG TAAGAAGGCC 
TTAAAGGTTA GAACTTCTAC CACCTTCAGA TTGCCAAAGA CCTTACAATT GTCTAGAGCT
CCAAAATACG CCAGAAAGTC CGTTCCTCAC TACAACAGAT TAGATGCCTA CAAGATCATT
GTCTCACCAA TTGCCTCTGA AACTGCCATG AAGAAGGTTG AAGACGGTAA CATCTTGGTT
TTCCAAGTTG ACATCAAGGC CAACAAGAAC CAAATCAAGG CTGCAGTCAA GGAATTATAC
GAAGTCGATG TCTTGTACGT CAACACTTTG ATCAGACCAA ACGGTACCAA GAAGGCTTAC
ATCAAATTGA CTGCTGACCA CGACGCTTTG GATGTTGCCA ACAGAATTGG TTATATTTAA
 
Protein sequence
TTKASAAKKA VLKGTNGKKA LKVRTSTTFR LPKTLQLSRA PKYARKSVPH YNRLDAYKII 
VSPIASETAM KKVEDGNILV FQVDIKANKN QIKAAVKELY EVDVLYVNTL IRPNGTKKAY
IKLTADHDAL DVANRIGYI