Gene PICST_60761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60761 
Symbol 
ID4839428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1441593 
End bp1442399 
Gene Length807 bp 
Protein Length268 aa 
Translation table12 
GC content43% 
IMG OID640390743 
Productpredicted protein 
Protein accessionXP_001385278 
Protein GI150865885 
COG category[S] Function unknown 
COG ID[COG4021] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0820783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.624062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGT CTCGTTTTGA ATATGTCAAA CAGTTTGAAC GCGAAAACTA CCTTCTTCCA 
GATACATACA TAGTGATCCG GGTAGATGGG AAAGGTTTCC ACAAATTTAG CCAAGAGTAC
GAATTCGACA AACCGAATGA CATACGGGCT TTAAATGTCA TGAATAGAGC TGCCCAGGCA
GTTGTTGAAC TGTACAGTGA CGTACTTATG GCGTATGGCG ATTCAGACGA GTACTCCTTC
TTGCTCAGAA AGAATTGCCA ATTGTACGAG AGACGTGAGA TGAAGTTGAT AACAATGTTT
TCTCTGATGA TTCTGACTAA CTACTTCTAC TTTTGGAACG AAGAATTTCC GGAGAAAAAG
TTGAAGCAGT CAAGATTACC TAACTTCGAC GCTCGGGCTG TATTATATCC CAACTTTGCA
TTGATTAAAG ATTACTTCAG CTGGCGTCAA GTAGATTGCC ACATTAACAA TTTGTACAAT
ACGACGTTCT GGGCTCTTGT CTTAAAAGGA GGGATGACTC CTCAGGAAGC TGAAAACAGG
TTGATAGGCA CTGTAGCTAG CGACAAGAAT GAGATCTTGT TTCTGCAGTT TGGCATAAAT
TACAATAACG AGCCGGAAAT CTTCAAAAAG GGCACGATTA TCATGAGAGA ATTGGACGAG
GAAGATTCGA GAGACGAGAA GGAATTGTCG GCCAGACAGA AACAGAGAAT CGACAAGAAG
AGAAAGAAGG CAGAAATCAA GCTTTTGCAC GAAGACTTGA TCACGAGCGA AACATTCTGG
TCCTCGCGGC CATGGCTCTC TCTGTAG
 
Protein sequence
MAKSRFEYVK QFERENYLLP DTYIVIRVDG KGFHKFSQEY EFDKPNDIRA LNVMNRAAQA 
VVESYSDVLM AYGDSDEYSF LLRKNCQLYE RREMKLITMF SSMISTNYFY FWNEEFPEKK
LKQSRLPNFD ARAVLYPNFA LIKDYFSWRQ VDCHINNLYN TTFWALVLKG GMTPQEAENR
LIGTVASDKN EILFSQFGIN YNNEPEIFKK GTIIMRELDE EDSRDEKELS ARQKQRIDKK
RKKAEIKLLH EDLITSETFW SSRPWLSS