| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_60739 |
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| Symbol | SEC65 |
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| ID | 4839135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 536334 |
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| End bp | 537164 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640390450 |
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| Product | signal recognition particle subunit |
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| Protein accession | XP_001384766 |
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| Protein GI | 150865516 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1400] Signal recognition particle 19 kDa protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.022276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAA GACCCGTATT GGAGGAGGTC GATGACGACA TCGACAACAT GGACTTAGAC
ATAGCAGAGT TTGATCCATC ATTAAAAACT CCTGTTGCAC CTTTGCGTCC AGAACCTACG
GTAACCAGAT CACAAGACCT GGAGCCTCCT CTTTTCCCCA ATATACCTTT GCCTAACTTA
GACCAGCCCA TACAGCATCA AGGAATCCGT GCTACCAAAA AGGATATCGT GAATCCAAAT
GACTTTTCAC AGGAGGAAAG AGACCATTTG AAGAACTTCC AGATAATATA TCCCTGCTAC
TTTGATTTGA ACAGATCGCA CAAGGAAGGC AGAAGAGTCG CCGTTTCCAA AGCTGTCGAA
AACCCTTTGG CCAAAACAGT CTCTGATGCT TGTCGTTCGT TCAACTTGCC AGTTTTGTTG
GAGTTGGACA AAACCCATCC ACAAGATTTT GGTAATCCAG GCAGAGTCAG AGTGTTGTTG
AAAGATCAAG TCAATGGAGG AAAGATCACC GACTCGAGGT TCAAGACAAA GAGATCTTTG
TTCAACGCCA TTGCCGAATA CTTGGAAGAC CACCCGACCA CAGTAGAAAG CGTAGGTAAA
AAGAGCGGAA TTGCCTTCCC TCCGGAATTC GAGACTGGCT TTGAGCCTGA GGAAATCCCC
CTCGTTAAAG GTTTCAAGAT GAATACCATC GTTCCTGTTC ATTCCAACTT CACCCTCAAG
CATCCTATGA CCAAGAGTAT CTACGATCCT CTCCCTGAAC AGCCGGAACA GGCCAAGTTG
CCCAATGTTC CTAAGCAACA GAAGAAGAAG GTCATGAAGA TCAGAGGTTA G
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| Protein sequence | MSKRPVLEEV DDDIDNMDLD IAEFDPSLKT PVAPLRPEPT VTRSQDSEPP LFPNIPLPNL
DQPIQHQGIR ATKKDIVNPN DFSQEERDHL KNFQIIYPCY FDLNRSHKEG RRVAVSKAVE
NPLAKTVSDA CRSFNLPVLL ELDKTHPQDF GNPGRVRVLL KDQVNGGKIT DSRFKTKRSL
FNAIAEYLED HPTTVESVGK KSGIAFPPEF ETGFEPEEIP LVKGFKMNTI VPVHSNFTLK
HPMTKSIYDP LPEQPEQAKL PNVPKQQKKK VMKIRG
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