Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_60431 |
Symbol | |
ID | 4839170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 1654972 |
End bp | 1655718 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640390485 |
Product | predicted protein |
Protein accession | XP_001385320 |
Protein GI | 150865913 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.438551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00225495 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTTGGGGAAG ATTTCCTCAA GAACTGGAAG GAAGCGGAGC AGTCCATAAC GAAGCTTATT GAGATATGGA CAAAGACGGT GATGTTGGTG GAAAGATACG AAAAGAGACA ACAGCAGATC AGCTACGACA ATGGTAAATT TGTTGAAATG ATCAATGGCT TCAAAACGTT AAACACCAAG TTGTATCCAA ATGAAAATGA AACATTACTT AGCGAAAATT CACACAAGGA CGATATCAAT TTATTGAATG ATTCGCTCGG GTACATCGGG GAGTTCTTCA ATAAGTCGAG TCAAACTTTG ATCGACGACA GCTACACTGT CAACACCATT ATTTTGGAAA AGTTCAAGAA CTTCCTTGAC TACTTATACT CCCTCCAAGA GTTGTTTGAA AGAACCAAGA AACAATCGAT CAACAATATT GACCAATTGG AAAAGAGAAT CAAAGAAAAT GAAATAAGAT ATAACAAGCT CAGCACCGAA GACGCTGACG TCAAGGGTGC CGACTTAGCC AAGTTGCGTC AAATCATTAT CAATGACAAG CAGGAGATCT TCCAGCAGCT CAATAGGGAC TGGTTAATCA AAAACTGCTG TTTCGAAGAG TTCCTCATGT TCCAGGAAAC ACAATATTTG ATTGGTGAGT TGTGGATTGA CTGGTCCAAA GCTAGATTAA AGTTTCAGGA GGAGATGTTT AGCTTACTGG AAAACTTGAG TAACGAGATT GTCAATGACA TGCCACTTAA TAGATAA
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Protein sequence | VGEDFLKNWK EAEQSITKLI EIWTKTVMLV ERYEKRQQQI SYDNGKFVEM INGFKTLNTK LYPNENETLL SENSHKDDIN LLNDSLGYIG EFFNKSSQTL IDDSYTVNTI ILEKFKNFLD YLYSLQELFE RTKKQSINNI DQLEKRIKEN EIRYNKLSTE DADVKGADLA KLRQIIINDK QEIFQQLNRD WLIKNCCFEE FLMFQETQYL IGELWIDWSK ARLKFQEEMF SLSENLSNEI VNDMPLNR
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