Gene PICST_60431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60431 
Symbol 
ID4839170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1654972 
End bp1655718 
Gene Length747 bp 
Protein Length248 aa 
Translation table12 
GC content39% 
IMG OID640390485 
Productpredicted protein 
Protein accessionXP_001385320 
Protein GI150865913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.438551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00225495 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTTGGGGAAG ATTTCCTCAA GAACTGGAAG GAAGCGGAGC AGTCCATAAC GAAGCTTATT 
GAGATATGGA CAAAGACGGT GATGTTGGTG GAAAGATACG AAAAGAGACA ACAGCAGATC
AGCTACGACA ATGGTAAATT TGTTGAAATG ATCAATGGCT TCAAAACGTT AAACACCAAG
TTGTATCCAA ATGAAAATGA AACATTACTT AGCGAAAATT CACACAAGGA CGATATCAAT
TTATTGAATG ATTCGCTCGG GTACATCGGG GAGTTCTTCA ATAAGTCGAG TCAAACTTTG
ATCGACGACA GCTACACTGT CAACACCATT ATTTTGGAAA AGTTCAAGAA CTTCCTTGAC
TACTTATACT CCCTCCAAGA GTTGTTTGAA AGAACCAAGA AACAATCGAT CAACAATATT
GACCAATTGG AAAAGAGAAT CAAAGAAAAT GAAATAAGAT ATAACAAGCT CAGCACCGAA
GACGCTGACG TCAAGGGTGC CGACTTAGCC AAGTTGCGTC AAATCATTAT CAATGACAAG
CAGGAGATCT TCCAGCAGCT CAATAGGGAC TGGTTAATCA AAAACTGCTG TTTCGAAGAG
TTCCTCATGT TCCAGGAAAC ACAATATTTG ATTGGTGAGT TGTGGATTGA CTGGTCCAAA
GCTAGATTAA AGTTTCAGGA GGAGATGTTT AGCTTACTGG AAAACTTGAG TAACGAGATT
GTCAATGACA TGCCACTTAA TAGATAA
 
Protein sequence
VGEDFLKNWK EAEQSITKLI EIWTKTVMLV ERYEKRQQQI SYDNGKFVEM INGFKTLNTK 
LYPNENETLL SENSHKDDIN LLNDSLGYIG EFFNKSSQTL IDDSYTVNTI ILEKFKNFLD
YLYSLQELFE RTKKQSINNI DQLEKRIKEN EIRYNKLSTE DADVKGADLA KLRQIIINDK
QEIFQQLNRD WLIKNCCFEE FLMFQETQYL IGELWIDWSK ARLKFQEEMF SLSENLSNEI
VNDMPLNR