| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_60390 |
|---|
| Symbol | LIP11 |
|---|
| ID | 4839691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | - |
|---|
| Start bp | 177289 |
|---|
| End bp | 178230 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640391006 |
|---|
| Product | triacylglycerol lipase |
|---|
| Protein accession | XP_001385052 |
|---|
| Protein GI | 150865719 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CCAATTGACC GAGACATATA TTCAAATCTT TTTACTTACG CTCACCTCAT AGATATCTCA
TATTGTATAT CTAGCGTTGG AGGAATAAGT GAACCATTTC AATGTGATTT GAGCTGTGAA
GAACGGTTTC CTAATGTGAC TTTGGCGTAC CAATGGTATT TCGATGATCT GGTAACAGGA
TACATAGCCA CTACCTATGC CAACATCTTT AATTATAACG ATACAAGCAC TGAAAAACCA
CCGAAGAAGA CAATTATAGT CTCACTCAGA GGTACACGAT CGTTTTTCGA CTCTTACACT
GATTTGAAAG TCGACATGGT ACAATATTCC AACCTTAGAC ACAAACTCCC GTATTGCGGA
GACAATTGCA AAGTTCACAA AGGATTCTTT GAATACTACA TCCACACTCT TCTTAATATC
AGAGTAGTTT TAGACAAGGA ATTAAACTAT GAAAACTGCG AGTTGCTCAT TGTGGGCCAT
TCAATGGGAG GAAGTGTAGC TCTTTTACTC GCGCTACATT ATCTAGATCT AGGGTATGTC
CAAATGACTT TGGTGACAAT GGGACAACCT TTAGTAGGAA ACAGAGAGTT TGTCAAGTGG
GTTGACAAGG TAATGGGTAG TAATATTGAA CCCAAACACA ACACCTACAA TAGAAAGTAC
TTCCGAATAG TACATAAGAA TGATATTGTG ACCACTATCC CGAATAACAA CATTTTGAAC
GCCTATCACC AGTTTGACAA CCAGATCTAC TTGAACTGCT CGTCAGACAC AACAGTACCA
TTCCCAGATA CAGTGGTGGA TTGTGTAACG GGAGACAATC CTTACTGTAT CAGGAAAGAC
TTCCAGGGCA TCAGCCTAAT AGACTACATT AGTCGCAACT ATTTTAAAAG TCACAACACG
TACTTTCGTA AGCTAGGGCT TTGCGGAATG AAAATCAAAT AG
|
|---|
| Protein sequence | PIDRDIYSNL FTYAHLIDIS YCISSVGGIS EPFQCDLSCE ERFPNVTLAY QWYFDDSVTG
YIATTYANIF NYNDTSTEKP PKKTIIVSLR GTRSFFDSYT DLKVDMVQYS NLRHKLPYCG
DNCKVHKGFF EYYIHTLLNI RVVLDKELNY ENCELLIVGH SMGGSVALLL ALHYLDLGYV
QMTLVTMGQP LVGNREFVKW VDKVMGSNIE PKHNTYNRKY FRIVHKNDIV TTIPNNNILN
AYHQFDNQIY LNCSSDTTVP FPDTVVDCVT GDNPYCIRKD FQGISLIDYI SRNYFKSHNT
YFRKLGLCGM KIK
|
|---|
| |