Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_46913 |
Symbol | SKB1 |
ID | 4839416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 735766 |
End bp | 736710 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640390731 |
Product | methyltransferase family protein |
Protein accession | XP_001385152 |
Protein GI | 126137257 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00628221 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00811886 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAGCCCA ATCCAACGTA TAATCTCATG ATTGAGCCTA TACAGCCTCT ACGTGACAAT CTAGATAGCA TTGTATACTC ACAATTCCAC AAGGATTTCG TCAAATATGA GCAATACAAA CGGGCTATCG AGTTGGCACT TACAGATCTA GACGGGACTG CTGATATCTT GAATATTCTT ATAGTGGGTC CTGGAGAAGG CGGAATCGTA GATAAACTCA TAGATATCTT GAAAATAATG TCATTGAAGG TAAAGATCAC AGCATACGAA AAGAATCCCA AATGCACTCA AATATTGAAG GACAAGAATA GAAGCTTGTG GGATAACCTT GTAGATATCA AAATAGAAGA TATCAGAACG TCTAACCTCG AAAGGCAAGA TCTAGTGATA TCTGAACTAT TGGGCTCCTT TGGTGATAAC GAAGCTTGCC CGGAAATATT GTCATTTTTT AATATTCCAG AAAACCGTCC AAAAATAATG ATTCCGGAAA GTTATACTAG CTATTTACAA CCTGTTTTTA CTTCTTTGGA TCCTCCTAGT TTACAGCGTC CTTATTTGGT TCATTTAACC AAGTTCTACC CAATTGATGA ACCACAAGAG GTCTGGACTT TTGAACATCC GTCTGACTCA TCATCAGCAC AAAGGTCGAC TAATCTAAAA TTCCGAAATA CCAATATTGC CAAATGTATT TCCGGTTTTT ATGGCCATTT TTCAGCCACT TTGTACGGAC ATATCCAGAT TCAAATAGAG AGCAAGAGCA GATACAATTT TTGCAATAGC TGGTACCCTA TCTTCTTTCC AGTCAGCAAG ACAGACTTGG CTAGAGATGA AGTGTTCAAC TTTGAAATAG CTAGATATTC AAACTCTGAC CAACTCTGGT ACGAATGGAA TTTCAAGGAT AAAACATACA ACAAGAACGG AAATACCTAC GTCATTGATT TGTGA
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Protein sequence | LKPNPTYNLM IEPIQPLRDN LDSIVYSQFH KDFVKYEQYK RAIELALTDL DGTADILNIL IVGPGEGGIV DKLIDILKIM SLKVKITAYE KNPKCTQILK DKNRSLWDNL VDIKIEDIRT SNLERQDLVI SELLGSFGDN EACPEILSFF NIPENRPKIM IPESYTSYLQ PVFTSLDPPS LQRPYLVHLT KFYPIDEPQE VWTFEHPSDS SSAQRSTNLK FRNTNIAKCI SGFYGHFSAT LYGHIQIQIE SKSRYNFCNS WYPIFFPVSK TDLARDEVFN FEIARYSNSD QLWYEWNFKD KTYNKNGNTY VIDL
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