Gene PICST_46913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_46913 
SymbolSKB1 
ID4839416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp735766 
End bp736710 
Gene Length945 bp 
Protein Length314 aa 
Translation table12 
GC content38% 
IMG OID640390731 
Productmethyltransferase family protein 
Protein accessionXP_001385152 
Protein GI126137257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00628221 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00811886 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAGCCCA ATCCAACGTA TAATCTCATG ATTGAGCCTA TACAGCCTCT ACGTGACAAT 
CTAGATAGCA TTGTATACTC ACAATTCCAC AAGGATTTCG TCAAATATGA GCAATACAAA
CGGGCTATCG AGTTGGCACT TACAGATCTA GACGGGACTG CTGATATCTT GAATATTCTT
ATAGTGGGTC CTGGAGAAGG CGGAATCGTA GATAAACTCA TAGATATCTT GAAAATAATG
TCATTGAAGG TAAAGATCAC AGCATACGAA AAGAATCCCA AATGCACTCA AATATTGAAG
GACAAGAATA GAAGCTTGTG GGATAACCTT GTAGATATCA AAATAGAAGA TATCAGAACG
TCTAACCTCG AAAGGCAAGA TCTAGTGATA TCTGAACTAT TGGGCTCCTT TGGTGATAAC
GAAGCTTGCC CGGAAATATT GTCATTTTTT AATATTCCAG AAAACCGTCC AAAAATAATG
ATTCCGGAAA GTTATACTAG CTATTTACAA CCTGTTTTTA CTTCTTTGGA TCCTCCTAGT
TTACAGCGTC CTTATTTGGT TCATTTAACC AAGTTCTACC CAATTGATGA ACCACAAGAG
GTCTGGACTT TTGAACATCC GTCTGACTCA TCATCAGCAC AAAGGTCGAC TAATCTAAAA
TTCCGAAATA CCAATATTGC CAAATGTATT TCCGGTTTTT ATGGCCATTT TTCAGCCACT
TTGTACGGAC ATATCCAGAT TCAAATAGAG AGCAAGAGCA GATACAATTT TTGCAATAGC
TGGTACCCTA TCTTCTTTCC AGTCAGCAAG ACAGACTTGG CTAGAGATGA AGTGTTCAAC
TTTGAAATAG CTAGATATTC AAACTCTGAC CAACTCTGGT ACGAATGGAA TTTCAAGGAT
AAAACATACA ACAAGAACGG AAATACCTAC GTCATTGATT TGTGA
 
Protein sequence
LKPNPTYNLM IEPIQPLRDN LDSIVYSQFH KDFVKYEQYK RAIELALTDL DGTADILNIL 
IVGPGEGGIV DKLIDILKIM SLKVKITAYE KNPKCTQILK DKNRSLWDNL VDIKIEDIRT
SNLERQDLVI SELLGSFGDN EACPEILSFF NIPENRPKIM IPESYTSYLQ PVFTSLDPPS
LQRPYLVHLT KFYPIDEPQE VWTFEHPSDS SSAQRSTNLK FRNTNIAKCI SGFYGHFSAT
LYGHIQIQIE SKSRYNFCNS WYPIFFPVSK TDLARDEVFN FEIARYSNSD QLWYEWNFKD
KTYNKNGNTY VIDL