Gene PICST_46861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_46861 
Symbol 
ID4839593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1365934 
End bp1366743 
Gene Length810 bp 
Protein Length269 aa 
Translation table12 
GC content45% 
IMG OID640390908 
Productpredicted protein 
Protein accessionXP_001385269 
Protein GI150865878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0747954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000232161 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTGGGCTA TTGCAGGCTT GATATCGGTG CTTCTAGCCC AGGCTGCTGC ATTTGACTGC 
TCTGCCAAAG AATTGGAGCA TTACAACTTT GAGCTCTTGA AAGGGATTCA TCTGGTGACT
TCTCTCAAGG ATACGCCTCC TTCACAGACA AATTTGACGT GGTATTTCGG CATTTGTGAG
CCGATTAAAG AAGGTCTTGA TGCCTGTCCC CAGAATCTGG ACGTATGTGG AATCACCTCA
ATCATTTTGA AAGGTGACAG CAAGAACAGG GTCATTCTGG AAATTGTAAG CTTCAACACC
AACTTACAGA AGACATATGA ACCCTTTTCT GATTCTGAAA TCGATTCTAC AGGTATTGCA
ATTTCGTATA CTGGCGCCAC TTGGGGAGAC AATAGCATAA ATGCTGCACT CCGCTTTGTT
TGTCCGCCCA AGAATAACGA ACATATACTC GACAAGTTCA AATTAGACAG CTGGGACGGG
AAGAAATTGA AAGCTTCTAT GTATTCAAAG GCTGCTTGTA TAACCAGTGA TAAGGATAAA
TTGAAGCCGC CACCAAAGAA ACCTGACAAT GGCGAGTCCT GGGGCTGGTT CACGTGGATA
TTCATCTTCT TGGTGTTGTT CTTATCGATC TACATCGTCG GCGGAGCCTG GTTCCAGTAC
AACAAGGGCA ATGCAATCGA CTTCTCCAGC GCCTTGAGAG AGGTGTTGGA CAACTTTGTA
GAGTTGTTGA AGGGAATACC TGCCTTCAGC AGAGAGATCA TCGAGAAGTT CACCAGCAAC
AGCAACAGAG GCGAATATAG TGCTGTGTAG
 
Protein sequence
MWAIAGLISV LLAQAAAFDC SAKELEHYNF ELLKGIHSVT SLKDTPPSQT NLTWYFGICE 
PIKEGLDACP QNSDVCGITS IILKGDSKNR VISEIVSFNT NLQKTYEPFS DSEIDSTGIA
ISYTGATWGD NSINAALRFV CPPKNNEHIL DKFKLDSWDG KKLKASMYSK AACITSDKDK
LKPPPKKPDN GESWGWFTWI FIFLVLFLSI YIVGGAWFQY NKGNAIDFSS ALREVLDNFV
ELLKGIPAFS REIIEKFTSN SNRGEYSAV