Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_46861 |
Symbol | |
ID | 4839593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 1365934 |
End bp | 1366743 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640390908 |
Product | predicted protein |
Protein accession | XP_001385269 |
Protein GI | 150865878 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0747954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000232161 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTGGGCTA TTGCAGGCTT GATATCGGTG CTTCTAGCCC AGGCTGCTGC ATTTGACTGC TCTGCCAAAG AATTGGAGCA TTACAACTTT GAGCTCTTGA AAGGGATTCA TCTGGTGACT TCTCTCAAGG ATACGCCTCC TTCACAGACA AATTTGACGT GGTATTTCGG CATTTGTGAG CCGATTAAAG AAGGTCTTGA TGCCTGTCCC CAGAATCTGG ACGTATGTGG AATCACCTCA ATCATTTTGA AAGGTGACAG CAAGAACAGG GTCATTCTGG AAATTGTAAG CTTCAACACC AACTTACAGA AGACATATGA ACCCTTTTCT GATTCTGAAA TCGATTCTAC AGGTATTGCA ATTTCGTATA CTGGCGCCAC TTGGGGAGAC AATAGCATAA ATGCTGCACT CCGCTTTGTT TGTCCGCCCA AGAATAACGA ACATATACTC GACAAGTTCA AATTAGACAG CTGGGACGGG AAGAAATTGA AAGCTTCTAT GTATTCAAAG GCTGCTTGTA TAACCAGTGA TAAGGATAAA TTGAAGCCGC CACCAAAGAA ACCTGACAAT GGCGAGTCCT GGGGCTGGTT CACGTGGATA TTCATCTTCT TGGTGTTGTT CTTATCGATC TACATCGTCG GCGGAGCCTG GTTCCAGTAC AACAAGGGCA ATGCAATCGA CTTCTCCAGC GCCTTGAGAG AGGTGTTGGA CAACTTTGTA GAGTTGTTGA AGGGAATACC TGCCTTCAGC AGAGAGATCA TCGAGAAGTT CACCAGCAAC AGCAACAGAG GCGAATATAG TGCTGTGTAG
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Protein sequence | MWAIAGLISV LLAQAAAFDC SAKELEHYNF ELLKGIHSVT SLKDTPPSQT NLTWYFGICE PIKEGLDACP QNSDVCGITS IILKGDSKNR VISEIVSFNT NLQKTYEPFS DSEIDSTGIA ISYTGATWGD NSINAALRFV CPPKNNEHIL DKFKLDSWDG KKLKASMYSK AACITSDKDK LKPPPKKPDN GESWGWFTWI FIFLVLFLSI YIVGGAWFQY NKGNAIDFSS ALREVLDNFV ELLKGIPAFS REIIEKFTSN SNRGEYSAV
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