| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36375 |
|---|
| Symbol | |
|---|
| ID | 4839539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | + |
|---|
| Start bp | 1149547 |
|---|
| End bp | 1150395 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640390854 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384894 |
|---|
| Protein GI | 126136741 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTA TTGCCCAGAG ATTCTCCCAT TCCAGCACTA GCAATGTTTT GAACGAAATC
AACCAGGCAC AGACTGAATT CGCCGGAACT CCTCAGTTGG AATTGGCTCC TACAATCCAA
TTGCCACCTA TCTCACAACC GACGGATTTC TTGAGAGCTC ACACTGATGA TGCATCGAAT
CCTGACTGTA AAATCAAGAT TGCTCACGGT ACCACAACTT TGGCCTTCAG ATTCCAAGGT
GGAATTATTG TAGCAGTAGA CTCCAGAGCC ACTCAGGGTA ACTGGATTGC TTCGCAAACC
GTCAACAAGG TTATCAGAAT AAACCCATTC TTGTTGGGAA CGATGGCTGG TGGTGCAGCC
GACTGTCAGT ACTGGGAAAC CTGGTTGGGT ACCCAATGTA GATTGCACGA GCTTCGAGAG
AAGGAAAGAA TCTCTGTAGC AGCTGCCTCG AAGATCTTGG GTAACTTGGT CTACGAATAC
AAGGGAATGG GTCTTTCTAT GGGAACTATG GTTTGTGGTT ATACCAAGAA GGAAGGTCCC
ACCATCTACT ATGTAGACTC TGACGGTAGC AGATTGAAGG GCGATTTGTT CTGTGTAGGT
TCGGGTCAGA CCTTTGCCTA TGGTGTGTTG GACTCCGAGT ACAAGTGGGA CTTGACTGTA
GAAGAGGCGT TGTATTTGGG CAAGAGAAGT ATCTTGGCTG CCACGCATAG AGATGCCTAC
TCTGGTGGTT CGGTCAATTT GTACCATGTG ACTGAAAACG GGTGGATCTA CCACGGAAAC
CACAATGTTG GTGACATTTT CTGGGACATC AAAGCCCAAG AAGGGTCGTT CAACAATGTA
GAAGGTTAG
|
|---|
| Protein sequence | MNSIAQRFSH SSTSNVLNEI NQAQTEFAGT PQLELAPTIQ LPPISQPTDF LRAHTDDASN
PDCKIKIAHG TTTLAFRFQG GIIVAVDSRA TQGNWIASQT VNKVIRINPF LLGTMAGGAA
DCQYWETWLG TQCRLHELRE KERISVAAAS KILGNLVYEY KGMGLSMGTM VCGYTKKEGP
TIYYVDSDGS RLKGDLFCVG SGQTFAYGVL DSEYKWDLTV EEALYLGKRS ILAATHRDAY
SGGSVNLYHV TENGWIYHGN HNVGDIFWDI KAQEGSFNNV EG
|
|---|
| |