Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_32496 |
Symbol | |
ID | 4839203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1654381 |
End bp | 1654812 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640390518 |
Product | predicted protein |
Protein accession | XP_001385013 |
Protein GI | 150865690 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00223885 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGTTGCT CAAATTGCCA ACCTGAAATA AAAACACTGT TGCATTCTAA AGACTCTAAT GACTTTGAGG ACGATGTATG GGGCGATGAT GACGTGTATG TCGATGCCAA TGCAGATGTA AAAAGGGCCC ATCAGAAACA GGGATACCTT GATGGTCTTG CCAGTGCTCA GGAATCGTCT CTCCAATCTG GATTTGATAA AGCATTTTCT GACGGTGCAA GAATGGGAGC AGCAGTAGGT AAGATCTTGG GTGAACTCCG CGCTTTAGGC GAAAGCGAAC TGTTTTACCA AGCTACTAAG GAGTTGAACA TTGCCAAGAT CATGGACAAG AAGTACTTCG ATAGTGAATT GAAAATTCAG AAGAACCATG AAGTAATATA TAAATGGCAG AAGATTGTAG CACAACATCT TGAAGACGCA ACAAAGGCAT AG
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Protein sequence | MGCSNCQPEI KTSLHSKDSN DFEDDVWGDD DVYVDANADV KRAHQKQGYL DGLASAQESS LQSGFDKAFS DGARMGAAVG KILGELRALG ESESFYQATK ELNIAKIMDK KYFDSELKIQ KNHEVIYKWQ KIVAQHLEDA TKA
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