Gene PICST_32496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_32496 
Symbol 
ID4839203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1654381 
End bp1654812 
Gene Length432 bp 
Protein Length143 aa 
Translation table12 
GC content42% 
IMG OID640390518 
Productpredicted protein 
Protein accessionXP_001385013 
Protein GI150865690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00223885 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGTTGCT CAAATTGCCA ACCTGAAATA AAAACACTGT TGCATTCTAA AGACTCTAAT 
GACTTTGAGG ACGATGTATG GGGCGATGAT GACGTGTATG TCGATGCCAA TGCAGATGTA
AAAAGGGCCC ATCAGAAACA GGGATACCTT GATGGTCTTG CCAGTGCTCA GGAATCGTCT
CTCCAATCTG GATTTGATAA AGCATTTTCT GACGGTGCAA GAATGGGAGC AGCAGTAGGT
AAGATCTTGG GTGAACTCCG CGCTTTAGGC GAAAGCGAAC TGTTTTACCA AGCTACTAAG
GAGTTGAACA TTGCCAAGAT CATGGACAAG AAGTACTTCG ATAGTGAATT GAAAATTCAG
AAGAACCATG AAGTAATATA TAAATGGCAG AAGATTGTAG CACAACATCT TGAAGACGCA
ACAAAGGCAT AG
 
Protein sequence
MGCSNCQPEI KTSLHSKDSN DFEDDVWGDD DVYVDANADV KRAHQKQGYL DGLASAQESS 
LQSGFDKAFS DGARMGAAVG KILGELRALG ESESFYQATK ELNIAKIMDK KYFDSELKIQ
KNHEVIYKWQ KIVAQHLEDA TKA