| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_45484 |
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| Symbol | |
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| ID | 4838449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 942754 |
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| End bp | 944124 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389764 |
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| Product | predicted protein |
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| Protein accession | XP_001384484 |
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| Protein GI | 150865321 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00903178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0734947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCAGA AACCATCATC CAAGCCTATA AGGCAGGATT ACATTGCCAA AGTGCGTTAT
ACGAACAACT TGCCTCCACC ACCATTGAAT CCTAAATTCA TACAATATAA CACTACAGAA
CAGGTTTCGT CACAGAAGGA AGCCGAATAC CTTATTTCGT CAGTCTTTAG AAAGGAAAAC
TTCACTCGTT TGATGGAGAA CATCGACGAG GAGTTAGGTA TGAACTTGAA CTTGATCAAT
AATCGTGGCT TTTTGGATAA TGGGGACGAA ACGGTTATCA ACAACTTTGT AACAAAAGAC
AGTGGTAATA GTAATAGCAA CAAGAGCGGG TTGGTGACGT TGCACCCTCT GGATCGGGCT
TTGTTAAGAG ATGCTGGTAT CGGCAAAATT TCCAAGTCGG AGCCTGGTGT TTCGTTTTTG
AGAAGAACTG AGTATATCGC CGATATGCAT GTAGCTAAAG TTAATGATGA ACTTGAAGAT
TCGAAAAAGA AGAAGAAGAA TACAGCCGAG ACTCATGATC CTGAGGCTCA GTTACGTGCT
GTGGAAGACA CCTTTGATAA TGCCCAGGAG TCGTTGACTA ATTTCGCACG CTTGAAGCAC
CCCAAGAAGA AGCATTTGAA GGCTGTGGCT GCCTGGCCGT TATTGCCGGA CACTTCTGCA
ATGGACACAA AGTATATTGC TGTCAAATTT TTGGGCTCAG CTTCTATCAG CAGAGAATTA
CAAGCCAACA AGAGAAAAGA CAAAAACTAC AACGAGGTTT TGGAGAAGAA TGCCTTGGAG
ACAGCTATAT TGAAGCCAAT CACATCTGAT GATGGAGAAT GGATATCGTT TTACGAAGTT
CGTGACGCCA ACAAGGCTGT GGAATTAAAC AGCCGCTTGA ACTCCACAGA AAGGGAACGT
CCCATTGTCA ACATGCTAGA CGAAGACGTC GAGGGCCAGG AACTGTACAA GTTCAAGCAT
TTAAAGAATT ATGATATGAA CTTCAACAGA TTCACTAAGC CCTACGAAGA GTTATCAATC
AAATTTATTC CAGAAGAAGT CGGATCGAAG AAGAGGAAGG TAGCATATTA TTACCCGGTT
TCGGGACGTA TCGACTTGAA AAAGCATCGT TCCTCTACAA ACTCGGAAAT CAACCGTTTC
CTCAAGGACA GTACTGTAGA CGTTATCAAC TTCAAGTTAC GTGAACCAAG CACCAACGAA
ATTAAAAAGA TGGATGCTAT TAGATCTGAG TTTGATCCGA TGGAATACGA AGGTGAAGAA
GAGGAAGAGG ACGAAGAGGA CGATGCTCAA GCTGACGATG CTCGAGCTGA GGATGTTCGC
GATGTTGGTG AAGAATTTAA CGAGGCTTCA AAAACAGATG AGGCCGACTA A
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| Protein sequence | MSQKPSSKPI RQDYIAKVRY TNNLPPPPLN PKFIQYNTTE QVSSQKEAEY LISSVFRKEN
FTRLMENIDE ELGMNLNLIN NRGFLDNGDE TVINNFVTKD SGNSNSNKSG LVTLHPSDRA
LLRDAGIGKI SKSEPGVSFL RRTEYIADMH VAKVNDELED SKKKKKNTAE THDPEAQLRA
VEDTFDNAQE SLTNFARLKH PKKKHLKAVA AWPLLPDTSA MDTKYIAVKF LGSASISREL
QANKRKDKNY NEVLEKNALE TAILKPITSD DGEWISFYEV RDANKAVELN SRLNSTERER
PIVNMLDEDV EGQESYKFKH LKNYDMNFNR FTKPYEELSI KFIPEEVGSK KRKVAYYYPV
SGRIDLKKHR SSTNSEINRF LKDSTVDVIN FKLREPSTNE IKKMDAIRSE FDPMEYEGEE
EEEDEEDDAQ ADDARAEDVR DVGEEFNEAS KTDEAD
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