Gene PICST_45467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_45467 
Symbol 
ID4838438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1237674 
End bp1238108 
Gene Length435 bp 
Protein Length144 aa 
Translation table12 
GC content47% 
IMG OID640389753 
Productpredicted protein 
Protein accessionXP_001384533 
Protein GI126136018 
COG category[S] Function unknown 
COG ID[COG0401] Uncharacterized homolog of Blt101 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.564065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCTACT GTATTTCCGA CTGTGTGATG ATCGTTCTTT CGGTCTTATT CCCTCCCTTG 
CCGGTATGGA TTAGAAGAGG TTTCTGTTCG TCAGATTCGC TCATTAACAT CTTATTATGT
ATCCTAGGCT ATTTCCCTGG TTTGATCCAC TCGTGGTACA TCATCGCCAA ATATCCGCCT
TACAGCTCTG AAACGAAGGT GTTCTATGTA TATAGGAGCG ACTTGGAAAA CCAGACGCCC
AGAGGTTCTG ATCACCATGT GCATATTCAC CAGCACTGCG AACAGCAACC ACAACGCCAG
CAAGCCCAAA AGCCAATCGT CAACCAGCCC TTATGTGTAG AAACCCCTCA ACCTCAATAT
GGTGCTGTCA CAGAAGGTTC GTCGTCTGGT GCCCCTCCTG CTTACACAGA ATTCGACAAC
AAGAACCAGC ATTGA
 
Protein sequence
MCYCISDCVM IVLSVLFPPL PVWIRRGFCS SDSLINILLC ILGYFPGLIH SWYIIAKYPP 
YSSETKVFYV YRSDLENQTP RGSDHHVHIH QHCEQQPQRQ QAQKPIVNQP LCVETPQPQY
GAVTEGSSSG APPAYTEFDN KNQH