Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31723 |
Symbol | |
ID | 4838689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1525329 |
End bp | 1526021 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640390004 |
Product | predicted protein |
Protein accession | XP_001384595 |
Protein GI | 150865396 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.490385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.555446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTGC TAGTAATAAA CCCTAATTCT TCTGAGAAGG TAACTGAAAA TCTCTCGAAA ACGGTGCTGA GCCCAGAAGG TGTAGAACTC GTTTTCTATA CGGGACCTGA GTCCGCTCCG AGAGAGATTG TTCCTTCAAC TTCTTGTGCT TCAGAACAGG CGGTCCTTCC AGACTTGGTT TCCAAAGGGG CAATTGAGAT CTACGATGGC TTTCTCGTTT GTTGCTATTC AGAACATCCG CTTGTTGGTT CGCTTCAGAA ACTCACCAGC AAGCCTGTGT TGGGGATTAT GCAGGCCACG CTTCTCTATG GGCTCCTGGT GGGTTCAAAG CTGGTAATTA TCACAAGCGT CAGTGAATGG AACGAAGTGT TGGACACAGC CGTCACCGAC TTTGTAGGTA GCTCTAGCTT TCCGAGCAGG AAATTTGCAC CCACCCGGGC TTTGGATGTT AGTGTTCTTT CGCTCAGCGA TCCTGAAGAG TTCAAGAAGA TTGAAAATCG GGTAGATGTC GTTTTGAACA AGGAGTATGC GGATGAAAAC ATAAAGACGG TATTGCTCGG ATGCGCGGGT ATGGCAGGAC TTAACGAAAA GTTGAGCGCT GCTTTTGAGG GAGTGGTGTT TGTTGATAGT GTCAAGGTGG GTGTGGAGTT ATTGGCGCTG TTGTGTAGAT TTCGCAGTCA ATTACATCCA TAG
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Protein sequence | MKLLVINPNS SEKVTENLSK TVSSPEGVEL VFYTGPESAP REIVPSTSCA SEQAVLPDLV SKGAIEIYDG FLVCCYSEHP LVGSLQKLTS KPVLGIMQAT LLYGLSVGSK SVIITSVSEW NEVLDTAVTD FVGSSSFPSR KFAPTRALDV SVLSLSDPEE FKKIENRVDV VLNKEYADEN IKTVLLGCAG MAGLNEKLSA AFEGVVFVDS VKVGVELLAS LCRFRSQLHP
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