Gene PICST_31652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31652 
Symbol 
ID4838849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1354481 
End bp1356613 
Gene Length2133 bp 
Protein Length710 aa 
Translation table12 
GC content39% 
IMG OID640390164 
Productpredicted protein 
Protein accessionXP_001384558 
Protein GI150865370 
COG category[Z] Cytoskeleton 
COG ID[COG5059] Kinesin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.279312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACT CTCAGGATTC CAAAAACGGT GTCGGTGTGA AATTGACGCC GTCCATCTTG 
CAAGAATCGA GTACCTCAGT TCTCAATACC CTTAAACCTG TCACTAGCAA CGAAAGGGAC
AAGGACATAT ATCCCAATAA ACGGCCCAAA TACACAACCA GCACTTCCCG AAGCTCTGTC
AATAGGTTAA TGTATGGTTC ACAGATTAAC CATGACGTTT ACAGCTTTAA GGAGCGAGAT
TTGGCCGAGA AATTCCTCTT GAAGCTGGAT TTGACTAGTA AAATTTCCAC TATAAAGACC
AAATTGCAAG AGGAAGACCT CCAAAGTTAT CAGTTAAGTC AAGAGTGCAT TCTGTTGAAG
AAACAGGTGG CTTCTGTGAG AAGTCAGATT TCTGAGTTGG GAGATTGCGA AGAAATGTCA
TTGAAGTCGT TAAAAAACAA ATTTGAGATT CAGACTAGAG AGCTCAGGAT CAAGCACGAA
CACAAATTAA ACCAACTTAA AGAGGATATG AGCAATCAGG CAAAGAAGAT TATACAGGAT
AACAATGCTG GATATTTAGA AGAGAAAGAT AAACTTGTGA TGGTGAACGA AACGTTGGCC
AAACTGGCCC AACAGCAAAT GCTGGAATTC CGTAACAAGC TTATTAAGTT GAAAGAAGAC
CATTCAAAAA ATTTGAGTAA CAGAACAGCA CAATTGGAAA AGAAGATTGA AAGTGTAAAA
TCCAAAATTT TGGAGCTCGA TACTGAATTG GAAACGAGTT TAAATGTAGA AACTGCGGAA
AGACAGCAGG CACTTAATGG CATTGAAAAA GAAACAAGTC GTCTAAAAGC AATACTAGAA
CAATTACAGG CAAAGTTCAA GGTCAAGGAA GCGGAAATTG AGCTTTTGCA AAACACATTG
GTGTCAAAGA GAGAAAGTAT AGCAGCTTTG GGGAAATCGT ATGAAGATAA AACGCAGCAA
ATTGAACATT ATGAGCAAGA AACTGCCTTG ATAAATGTCA GGTTAGCTAC TCATGAAAGT
GATAGACGTG CACTTCATAA TACACTTCAA GAGCTCAAAG GAAATATTCG GGTCTTCTGT
AGAGTAAGAC CAGCATTGAC TCAAGAAAAG GTATCAAGCT TGGATATCCC AGACGATGAA
ATTAATGATG ACTCAGCACA GGAGCTTATA CTTTCCAGAG ATGGTGAGGC AAGCAATTCC
AATTCTTATT CCACATACAA TAGTAACAAG AATAGCTACA AATTTCAATT TGACCACATA
TTCCTGCCTA CTCTGACAAA TGAGGACATC TTTGAAGAAA TATCCCAGCT TATTCAATCA
TCATTGGATG GCTATAACGT TTGTGTTTTT GCATATGGAC AGACCGGCTC TGGAAAGACG
TTTACGATGT CAAATCCTGG CAACGGAATG ATTCCTATGT CATTGGATAA AATCTTTGAA
GACATAGATG ACCTTCAAGC GAAGGGATGG AAGTATGAGG TTGAAGGGCA AGTGGTAGAG
ATTTACAATG AGAATATTGT AGATCTATTG AGTCCAAGAG ACTCTACAGT AAAATACGAT
ATCAAGCATG ATGATGACGA AGGAAAAACG TACATTACAA ATATTACCAC TGTGTCCATT
TCATCCAAGA ACCAAGCTGA ATCTATTCTT GACAGGGCTA CAAAGAACCG TTCTACGGCC
AGTACAAGGG CCAACGACAG GTCTTCCAGA TCACATTCAA TTTTCACAAT ACGGTTAAAT
GGTGAAAATC TCAAGACTGG AGCCAAGAGT CAGGGCACCT TGAACTTGGT TGATTTGGCA
GGTTCTGAAA GATTGTCGTC ATCACAGGCT ACAGGTGACA GATTAAAGGA AACGCAGGCT
ATCAACAAGT CGTTGTCATG TTTGGGGGAT GTAATTTATT CGTTGAGTCA AAGACAACAA
CTGTCACAGC TTGTTGCCAA TCAACATGTA CCATATAGAA ATTCCAAACT CACTTACTTG
TTGAAGCACA GCCTTGGAGG AAATTCTAAG ACGTTGATGT TTGTCAATAT TTCACCTCTT
TTGAAGAATT TCAACGAGAC TCTAAACTCA CTACGGTTTG CAACGAAAGT AAATCGTACA
AAACTTTCAA GCTCCAAGCC TAATTCACAA TAA
 
Protein sequence
MDDSQDSKNG VGVKLTPSIL QESSTSVLNT LKPVTSNERD KDIYPNKRPK YTTSTSRSSV 
NRLMYGSQIN HDVYSFKERD LAEKFLLKSD LTSKISTIKT KLQEEDLQSY QLSQECISLK
KQVASVRSQI SELGDCEEMS LKSLKNKFEI QTRELRIKHE HKLNQLKEDM SNQAKKIIQD
NNAGYLEEKD KLVMVNETLA KSAQQQMSEF RNKLIKLKED HSKNLSNRTA QLEKKIESVK
SKILELDTEL ETSLNVETAE RQQALNGIEK ETSRLKAILE QLQAKFKVKE AEIELLQNTL
VSKRESIAAL GKSYEDKTQQ IEHYEQETAL INVRLATHES DRRALHNTLQ ELKGNIRVFC
RVRPALTQEK VSSLDIPDDE INDDSAQELI LSRDGEASNS NSYSTYNSNK NSYKFQFDHI
FSPTSTNEDI FEEISQLIQS SLDGYNVCVF AYGQTGSGKT FTMSNPGNGM IPMSLDKIFE
DIDDLQAKGW KYEVEGQVVE IYNENIVDLL SPRDSTVKYD IKHDDDEGKT YITNITTVSI
SSKNQAESIL DRATKNRSTA STRANDRSSR SHSIFTIRLN GENLKTGAKS QGTLNLVDLA
GSERLSSSQA TGDRLKETQA INKSLSCLGD VIYSLSQRQQ SSQLVANQHV PYRNSKLTYL
LKHSLGGNSK TLMFVNISPL LKNFNETLNS LRFATKVNRT KLSSSKPNSQ