Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31652 |
Symbol | |
ID | 4838849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1354481 |
End bp | 1356613 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640390164 |
Product | predicted protein |
Protein accession | XP_001384558 |
Protein GI | 150865370 |
COG category | [Z] Cytoskeleton |
COG ID | [COG5059] Kinesin-like protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.279312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGACT CTCAGGATTC CAAAAACGGT GTCGGTGTGA AATTGACGCC GTCCATCTTG CAAGAATCGA GTACCTCAGT TCTCAATACC CTTAAACCTG TCACTAGCAA CGAAAGGGAC AAGGACATAT ATCCCAATAA ACGGCCCAAA TACACAACCA GCACTTCCCG AAGCTCTGTC AATAGGTTAA TGTATGGTTC ACAGATTAAC CATGACGTTT ACAGCTTTAA GGAGCGAGAT TTGGCCGAGA AATTCCTCTT GAAGCTGGAT TTGACTAGTA AAATTTCCAC TATAAAGACC AAATTGCAAG AGGAAGACCT CCAAAGTTAT CAGTTAAGTC AAGAGTGCAT TCTGTTGAAG AAACAGGTGG CTTCTGTGAG AAGTCAGATT TCTGAGTTGG GAGATTGCGA AGAAATGTCA TTGAAGTCGT TAAAAAACAA ATTTGAGATT CAGACTAGAG AGCTCAGGAT CAAGCACGAA CACAAATTAA ACCAACTTAA AGAGGATATG AGCAATCAGG CAAAGAAGAT TATACAGGAT AACAATGCTG GATATTTAGA AGAGAAAGAT AAACTTGTGA TGGTGAACGA AACGTTGGCC AAACTGGCCC AACAGCAAAT GCTGGAATTC CGTAACAAGC TTATTAAGTT GAAAGAAGAC CATTCAAAAA ATTTGAGTAA CAGAACAGCA CAATTGGAAA AGAAGATTGA AAGTGTAAAA TCCAAAATTT TGGAGCTCGA TACTGAATTG GAAACGAGTT TAAATGTAGA AACTGCGGAA AGACAGCAGG CACTTAATGG CATTGAAAAA GAAACAAGTC GTCTAAAAGC AATACTAGAA CAATTACAGG CAAAGTTCAA GGTCAAGGAA GCGGAAATTG AGCTTTTGCA AAACACATTG GTGTCAAAGA GAGAAAGTAT AGCAGCTTTG GGGAAATCGT ATGAAGATAA AACGCAGCAA ATTGAACATT ATGAGCAAGA AACTGCCTTG ATAAATGTCA GGTTAGCTAC TCATGAAAGT GATAGACGTG CACTTCATAA TACACTTCAA GAGCTCAAAG GAAATATTCG GGTCTTCTGT AGAGTAAGAC CAGCATTGAC TCAAGAAAAG GTATCAAGCT TGGATATCCC AGACGATGAA ATTAATGATG ACTCAGCACA GGAGCTTATA CTTTCCAGAG ATGGTGAGGC AAGCAATTCC AATTCTTATT CCACATACAA TAGTAACAAG AATAGCTACA AATTTCAATT TGACCACATA TTCCTGCCTA CTCTGACAAA TGAGGACATC TTTGAAGAAA TATCCCAGCT TATTCAATCA TCATTGGATG GCTATAACGT TTGTGTTTTT GCATATGGAC AGACCGGCTC TGGAAAGACG TTTACGATGT CAAATCCTGG CAACGGAATG ATTCCTATGT CATTGGATAA AATCTTTGAA GACATAGATG ACCTTCAAGC GAAGGGATGG AAGTATGAGG TTGAAGGGCA AGTGGTAGAG ATTTACAATG AGAATATTGT AGATCTATTG AGTCCAAGAG ACTCTACAGT AAAATACGAT ATCAAGCATG ATGATGACGA AGGAAAAACG TACATTACAA ATATTACCAC TGTGTCCATT TCATCCAAGA ACCAAGCTGA ATCTATTCTT GACAGGGCTA CAAAGAACCG TTCTACGGCC AGTACAAGGG CCAACGACAG GTCTTCCAGA TCACATTCAA TTTTCACAAT ACGGTTAAAT GGTGAAAATC TCAAGACTGG AGCCAAGAGT CAGGGCACCT TGAACTTGGT TGATTTGGCA GGTTCTGAAA GATTGTCGTC ATCACAGGCT ACAGGTGACA GATTAAAGGA AACGCAGGCT ATCAACAAGT CGTTGTCATG TTTGGGGGAT GTAATTTATT CGTTGAGTCA AAGACAACAA CTGTCACAGC TTGTTGCCAA TCAACATGTA CCATATAGAA ATTCCAAACT CACTTACTTG TTGAAGCACA GCCTTGGAGG AAATTCTAAG ACGTTGATGT TTGTCAATAT TTCACCTCTT TTGAAGAATT TCAACGAGAC TCTAAACTCA CTACGGTTTG CAACGAAAGT AAATCGTACA AAACTTTCAA GCTCCAAGCC TAATTCACAA TAA
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Protein sequence | MDDSQDSKNG VGVKLTPSIL QESSTSVLNT LKPVTSNERD KDIYPNKRPK YTTSTSRSSV NRLMYGSQIN HDVYSFKERD LAEKFLLKSD LTSKISTIKT KLQEEDLQSY QLSQECISLK KQVASVRSQI SELGDCEEMS LKSLKNKFEI QTRELRIKHE HKLNQLKEDM SNQAKKIIQD NNAGYLEEKD KLVMVNETLA KSAQQQMSEF RNKLIKLKED HSKNLSNRTA QLEKKIESVK SKILELDTEL ETSLNVETAE RQQALNGIEK ETSRLKAILE QLQAKFKVKE AEIELLQNTL VSKRESIAAL GKSYEDKTQQ IEHYEQETAL INVRLATHES DRRALHNTLQ ELKGNIRVFC RVRPALTQEK VSSLDIPDDE INDDSAQELI LSRDGEASNS NSYSTYNSNK NSYKFQFDHI FSPTSTNEDI FEEISQLIQS SLDGYNVCVF AYGQTGSGKT FTMSNPGNGM IPMSLDKIFE DIDDLQAKGW KYEVEGQVVE IYNENIVDLL SPRDSTVKYD IKHDDDEGKT YITNITTVSI SSKNQAESIL DRATKNRSTA STRANDRSSR SHSIFTIRLN GENLKTGAKS QGTLNLVDLA GSERLSSSQA TGDRLKETQA INKSLSCLGD VIYSLSQRQQ SSQLVANQHV PYRNSKLTYL LKHSLGGNSK TLMFVNISPL LKNFNETLNS LRFATKVNRT KLSSSKPNSQ
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