| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31554 |
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| Symbol | MGS2 |
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| ID | 4838514 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1090925 |
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| End bp | 1093421 |
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| Gene Length | 2497 bp |
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| Protein Length | 786 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640389829 |
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| Product | replication factor ATPase |
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| Protein accession | XP_001384164 |
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| Protein GI | 150865091 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000494738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATG AAGAGAGCCC TACTTCAAAC ACTTCATCAA ATGCATTAAG TATTCTTTCA
CTTCCATTGG CTGAAGCCAT TAGACCAAGA TCTCTAGATG AATATATTGG CCAGAAACAT
CTTATAGATC CGGACAATGG AGCCATCACC AACTTCATGA GACTAAGATA CTTACCTTCA
ATGCTACTAT ATGGACCTCC AGGAGTTGGA AAGACCACCA TGGCGTCAAT TATTGCAGAA
GAGTGTGGCT ATGTATTTGT AGAGTTATCA GCTACTGCTG CGACTGTTGC TGATCTTCGA
GATTTGCTGA CTACAATCAT GGCAGAAAAT AGGAAACGTG CAAGCCGGGG AGAAGAAGAA
TTGAAAGTAG TGGTATTCAT TGACGAAATC CACAGATTCA CCGTATCCCA ACAGGATTTC
TTATTGCCTT ATGTAGAGGA AGGAAACTTT GTCTTCATTG GAGCAACTAC AATTGATCCA
AGAAAGAGAA TACGACGAGC CATCTTATCG CGGGTACAGT GCTTCAGCTT GAATACTCTC
AATAATAATG AAGTTCTTGA AGTTTTGAAG CGTGCAATGC GTTTTGAGAA CATCCGAAGA
AAAGCTGTTC ATGGTCTTCG TTGCATTGAC CTCGACGACC AAAGTCTTTC TTTGATCATA
AAGACTGCTG GCGGAGACAC GAGAAAGGCT ATAAACTTGA TAGAGTTGCT AAACACAAAG
TATACAGATA GTCCTTACAA GGAGGGTGAC AATGACGTAC CCATCGTCAT GGACTTTTTG
ACTCTCAAAA AGAACATTAG GGACATGAGA TATTGTCAGT CTGGTCTTCA AGATCCACGA
AATATATCCT TACTTCTAAA CATGTTTGAT ACAATGAGAC AGCTTCCGAA TAGAAGAGAG
GTTTTACCCT GTTCACATGA GAAAATAGAT GAACTGGAAC CTTCTGAATC GAATTCGTTC
TCAGAAAGAA TGACTTCTGA TTTGGAAAAT AAATTATACA ATGAGAAAGA AGCTGAAAAT
GACGATTTTT TTTTCAAGGA ACAGTTTAAG ACATCGAAAT TCGACCCATG TGATACAAAT
CTAAATTACT TAGAACAAAT GCAAGTATCG GACGACAGCG ATGTCGAAAG TGCCCCACTT
TACAGTGACA CGGAAGATGA AACACCCCTT CTTAACCCCG TCCTATCATC AATAGAAGAG
TTCAGTATTC TCTCATCAGT ATATAGTATG GAGTTGCTTT TGAAGAGAGG GGAATCCCCG
ATCTTTATCT GTAAGCAATT GCTTTTATTC TCGGTATTAT TCTTGGACTG CGATGTTCTT
ACGATTAGGA AAGCCTTGTC CTTTTGGAAA TCGCTCAAGA GTACCAATTT AGATACACAT
ATGCTTTTGG CTAATTTTGT TGAGTGGCTC ACCAGACATT CAAAATTGAA GTCGAATGCA
GATAACGATC TCATCAAACA GATGAGACTA TCCAAAAGAT ATCTAACAAG ACGAAACTAT
CAGTGCCAGA GCCCACATAG TGTTAACATT GAATTCGATA TTTCGTATGA TGATGAGCTT
GTCAAATCTC TTGAAACAGA TATAATGACC ATGGATATGA ATGCGAGCCA GAATGCTGGC
TTCGTAATTT CTAGCATGGA TGAATTCACT TATGAGGACG ATTTCTGTCT TGGTGAATAT
TTTGAAAGTA TAGAACTGTG GTAAACATAA TTTTCGCAGC CTATTTTAGC GCCTTGTAAA
TATTTGAATT TTATTATACA ACTTATACAC TATGGTAGAT GAAATGACAA ATGAAACCAA
GCAAACAAAG GTTACCAAGA AACGCTCTTC CTTTCTTCGT CAACATATCC AATTCTGGAG
GAACAACTGT GCCATACTTT TCCTGGAAAT TGGAAGATTT GCCGTTAATC TACTCGTCTA
TGAAATCATT CTCCTATTTG AAATTAACGA TGGGATTGCC TTTGTAGTTA GAGGACTCTT
ATCTGGAGTT TTGTACTTCA TCGAATTCAT TATCGTAATG AATATATTGT TGGTGTGTCT
TGTTTCCAAT GGAAATTTTT CTAATACTTC TGGGCAGTTC TCAGAGATTC ACGATTTATT
CTGGAACAAG AAGAAAGTAC TATCCACAGC TACAATCAAT GCCGCTTCCA ACCAAGAGAA
TAGCCCACAG TATTCTTCTG CAATTCAAAT ACAACGCTCA TCAGTTGATC TCACTCCACA
CTCTTCTTTT ATCCCCGAAG AAAGGGTAGA ACAACAAAAG AGTGCAACTA TGGAATCTAT
GGAATACTCC AAAATCAAGA CCGATTTTGC CCAATTTAAA GAAAATGTAT ACAACCAAGT
TGTAAAGGGC AAAGGACGAC TAGCTTCTCT CGAAGATTTG CAAGATACAA GAAGTGAAAT
TGATCCTATT GAGAGTACAG CAGACCTTTC TTTGGATAAT ATCAAGAAAC CTCTGCTGAG
AACTTCGTCC ATGTTCAAGT TTCACAGACA CAGATAA
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| Protein sequence | MDNEESPTSN TSSNALSILS LPLAEAIRPR SLDEYIGQKH LIDPDNGAIT NFMRLRYLPS
MLLYGPPGVG KTTMASIIAE ECGYVFVELS ATAATVADLR DLSTTIMAEN RKRASRGEEE
LKVVVFIDEI HRFTVSQQDF LLPYVEEGNF VFIGATTIDP RKRIRRAILS RVQCFSLNTL
NNNEVLEVLK RAMRFENIRR KAVHGLRCID LDDQSLSLII KTAGGDTRKA INLIELLNTK
YTDSPYKEGD NDVPIVMDFL TLKKNIRDMR YCQSGLQDPR NISLLLNMFD TMRQLPNRRE
VLPCSHEKID ESEPSESNSF SERMTSDLEN KLYNEKEAEN DDFFFKEQFK TSKFDPCDTN
LNYLEQMQVS DDSDVESAPL YSDTEDETPL LNPVLSSIEE FSILSSVYSM ELLLKRGESP
IFICKQLLLF SVLFLDCDVL TIRKALSFWK SLKSTNLDTH MLLANFVEWL TRHSKLKSNA
DNDLIKQMRL SKRYLTRRNY QCQSPHSVNI EFDISYDDEL VKSLETDIMT MDMNASQNAG
FVISSMDEFT YEDDFCLGEY FENEMTNETK QTKVTKKRSS FLRQHIQFWR NNCAILFSEI
GRFAVNLLVY EIILLFEIND GIAFVVRGLL SGVLYFIEFI IVMNILLFSE IHDLFWNKKK
VLSTATINAA SNQENSPQYS SAIQIQRSSV DLTPHSSFIP EERVEQQKSA TMESMEYSKI
KTDFAQFKEN VYNQVVKGKG RLASLEDLQD TRSEIDPIES TADLSLDNIK KPSSRTSSMF
KFHRHR
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