| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31261 |
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| Symbol | |
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| ID | 4838699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 350827 |
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| End bp | 351714 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640390014 |
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| Product | predicted protein |
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| Protein accession | XP_001384366 |
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| Protein GI | 150865233 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00981052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.533075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAG AGGCCGTCTT TCAGTATATA GAGCAGTATG CTCTGTCTGA AGAACTTGAA
GAAAAAGCCG CACAGCCAGA TTCTGGAATC GTAGATCTTC CTGTGGTTTC TTTAGCTCAG
AATCCAGATG TTCTCATCTT CGATGTGAGA AATATCCGAA TTCTCAGAGA GAAGTATGGG
ATTTTGGGAG TATTGACAGG AACTTTGGCC CAATATCCTC AGCAAAACTT CTTTCTTTCC
GTGCCTTTAA AGTTGTTCAT TTGGGAAGTG ATATGGTTGG TGGAATCTGG AAAAGCCAGA
CTTGTAGATC AAGCTAGATA CAGAATAGAG AAAGCTAGAC GATTGGCGGA AGGAGGCAGA
ATTGAAAACG ACAACAGGGT TCTCTTATCC AAGAACGAAA AACATGACAA TCTGAAGAAT
ACTCAGGAGA ATAGGGAGCC AAATTTTGTT GTCACTAAAA ATACGGATAC TTCAAAAAAA
TGTGAAGATT TTATTGCAGA ATATGAAATA CCCTTGAGAG ACTATTTGAA TGCGTATATA
AAAAGTTCAT CGCTAAAAAT TGAGGATATC CTTTCTCGTT ACCACAATTT CAAGTACTTG
AAGGAAATGG GCTTTTTTAT GAATCCAGGG CTTAAATTTG GTGGAGACTT GGTGATTTAT
CCGGGAGATC CTCTAAGATT CCATTCATAT TCCATTGTTA AATTTAACAT GGTGGATCTT
CAAGATTTGG TCGTAGGAGG AAGATTGGCA ACTAGTGTGA AGAAGAATAT TATCATTTTG
GGTGATGAGG AGAATTCTTC AAACGATCTT AATGACAATA TAGAAGCTTG TCTCAATCGA
CCTCCCCAAA AAGTAGCATT TTCCATTGAA TGGGCTGGCT TCGGTTGA
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| Protein sequence | MNEEAVFQYI EQYASSEELE EKAAQPDSGI VDLPVVSLAQ NPDVLIFDVR NIRILREKYG
ILGVLTGTLA QYPQQNFFLS VPLKLFIWEV IWLVESGKAR LVDQARYRIE KARRLAEGGR
IENDNRVLLS KNEKHDNSKN TQENREPNFV VTKNTDTSKK CEDFIAEYEI PLRDYLNAYI
KSSSLKIEDI LSRYHNFKYL KEMGFFMNPG LKFGGDLVIY PGDPLRFHSY SIVKFNMVDL
QDLVVGGRLA TSVKKNIIIL GDEENSSNDL NDNIEACLNR PPQKVAFSIE WAGFG
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