Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31239 |
Symbol | |
ID | 4838585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 297600 |
End bp | 299123 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389900 |
Product | predicted protein |
Protein accession | XP_001384355 |
Protein GI | 126135662 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.144771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.813098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATTA CTAAGCTAGA TAAGGCTCAT GTAGCCATAA CTATGAAGGC CATGAATGTA GGGGACAATA CATCTCATCG TCCAGGCTTC GAAAATCGAA ACTCTGATGA AGACATCAAT GAATACGACG GAAGACATTC TTCTAATGTA GAACCCATTC CAGAACAAGA AGGCACTATT CCAAAGTATA TGACTATTAA CAATCCTCCT AGAAATAAAT GGAGGTATTT ATCGTGTATA TTTCTAGGTC TCTGTGTGGG TTTCAATGAT GCTGCCCCAG GTGCCTTGTT ACCTCATATG GAGGTTTATT ATGGTATAAG TTACTCTGTA GCTTCTTTGA TTTGGGTAGC CTCAGCGACA GGGTTTATAG TCGTTGCCTG TCTTGCTCAT AAAATCCAGC CGTGGATGGG AAAGAGGTAT TCTTTAACTT TGGGATGTGC ACTTGGTGTT CTCAATTACC TAATTGTTGG TACCGGTACC AAATACCCTG CAATAGTGGC CTCTTTTTTC TTCGGAGGGG CTGGTAGTGC TCTTCAAATA GCCCAAACTA ATATCTTCGT TTCACGATTG GACAAAGCTT CCACTTATCT TTCCTTTTTG CACGGTGCAT ATGGAATTGG TGCAACAATT TCTCCCTTAT TAGCTACTTC GATTGTTGCA AGAGGAGTGA CATGGCATTA CTACTATTTT GTTCTCATGG GTATAATGTT CCCTAATATG ATTGCAATCT TCTATGCGTT TAAAAATTCT GATGAAGATT TGAAACCCTG GGACGAAGAT CCTAAAGATT TAGCTGTCTC TTATACAGCA GATGAGAGAT TGCGTGGTGA AGATGTTATA GAAATGACGG ACATTAATGC TACTCAAGAA TATCCCCAAT CTCACCAAAA CTTGATGCTC CTTGCACTTA AAACTCCTAC TACTTGGCTC ATCTGCTTTT TTGTTTTATT CTATCAAGGT GCAGAGGTCG CTATGGGTGG TTGGATAGTT TCATTCTTCC TTGATTATCG CCATGGAAAC CCGAAGTACG TTGGATATAC AGCTTCAGGT TACTGGGGAG GCTTGACTAT TGGAAGGCTA TGTTTAACCA AGCCTTTACA CAAAACTCTT GGGGCTAGAA GGTCTGTTCT AGTTGTCTCT TGCGGAGCTA TGATACTTGT AGCCCTTGTA TGGGCTGTCC CCAACCTCAT AGCTGAAGCA GTCTTGGTAG CATTTGCAGG TATGATGACT GGGCCAAATT ACCCATTGCT TGTAGTGTAC ACTGGACATG ATGGCTTAAT TCCTAGAAAA ATTCAAGTTA TCACTCTTAC TATTATGTCA GCTTTTGGCT CTTCTGGGGG TGCAATTTTC CCTTTCATTG TGGGTTTGAT TTCTCAAACG ACTGGAACAT TTGTTGTTTT GCCTATATTT ATCATATTGT ATTGCTTGGT TATTGTGATG TGGGCTTGTC TCCCAAATTT GGAAAGAAGA AATTCTACTC CGTCTAAGAG TTCGATATTG AGATTGTGGG AAAGAATTTG GTAG
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Protein sequence | MTITKLDKAH VAITMKAMNV GDNTSHRPGF ENRNSDEDIN EYDGRHSSNV EPIPEQEGTI PKYMTINNPP RNKWRYLSCI FLGLCVGFND AAPGALLPHM EVYYGISYSV ASLIWVASAT GFIVVACLAH KIQPWMGKRY SLTLGCALGV LNYLIVGTGT KYPAIVASFF FGGAGSALQI AQTNIFVSRL DKASTYLSFL HGAYGIGATI SPLLATSIVA RGVTWHYYYF VLMGIMFPNM IAIFYAFKNS DEDLKPWDED PKDLAVSYTA DERLRGEDVI EMTDINATQE YPQSHQNLML LALKTPTTWL ICFFVLFYQG AEVAMGGWIV SFFLDYRHGN PKYVGYTASG YWGGLTIGRL CLTKPLHKTL GARRSVLVVS CGAMILVALV WAVPNLIAEA VLVAFAGMMT GPNYPLLVVY TGHDGLIPRK IQVITLTIMS AFGSSGGAIF PFIVGLISQT TGTFVVLPIF IILYCLVIVM WACLPNLERR NSTPSKSSIL RLWERIW
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