Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31186 |
Symbol | TOK1 |
ID | 4839043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 151157 |
End bp | 153259 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640390358 |
Product | outward-rectifier potassium channel |
Protein accession | XP_001383990 |
Protein GI | 150864960 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000798921 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.515447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCTAG GTATCACACA ATTCCGTCGA CATGTCAAAG CGGCCCAGAG GGCGGTGACT CCTTCCCGAG AGCCTACTTT TTCGCTAAAT AATTACGATG ACAAGCTTCT TCCATTGCTT TATCATACAC CTAGAAATAA GGTCAAACAG AAGGACGTAC CGATGATAGT AAAAAACTCT CTAGCTATGC CCATTACAAC CGTTACCAGC ATGAAGGTAC GACCGGGAGA ACCGAATTTT GTATACTGGT ACTTTGTTTC GTCCTACTTC CCTCTTATAT CGGCTTGTTT GGGTCCGTTA GCCAACATGA TATCCATTAT ATCCCTTGTT CAACATTGGA GAATAGAAAA GGCTACTGGA AAAGAAGTGC TGGATGAACC TGGCCTAATT GTACTCAACT CGATGTCATT GGTATTCGGA ATCCTCGCAA ATATTTCACT ATTAATGAAT TTCTCCGGAA CGATCAAATA CCTTATCACC CAAGTTGTGT CCATAATCTG TTTTCTTGGT GCTGTAGTAG TGCTAATGGT GGATATAATC ATTACCAACC GTGATTTCAT TGGTCAAGAC CCTAAATACT CTCGTTCCGA AGGGTTCTGG TTCGCTGTAT TCACTACTTT TTACTACTTC TGCTGTGCTG TAACATTGCT TGTCAATTTC TTGGGCTACA AGTTGAATAA ATATCCGGCC ACTTTTAATC TCGATACAAA GCAGAGAACT TTAATGATAT ATACTATCTG CTTTGCTATA TGGAGCGTAT TTGGCTCCGT GGTTATGGCT CATATGATTG ACGACTTGAC CTATGGCTCG TCTTTGTACT ACTGTATCGT CTCGTTTCTT ACCATTGGCC TTGGTGACAT TCTTCCCAAG ACTCCTGGAG CTAAAGTCAT GGTGTTGATT TTGTCCTTGA TCGGTGTATT GATCATGGGG TTGATCGTGG CCATGATTAG ACAGGTAGTG ATGACCTCGG GAGGACCAAC AATCTTCTGG AATCACATAG AACGGGACCG TGAAAAGTTG TTAGCAAAGC TCAAGAGAGA GCATACTCCC CTTACTGCCG ACCAAGCATT CCATAAAATG AGGGTCATAC GAAGAAGGGC CCATGTTCAC CAATTGAATG TTTCTCTAGC ATCCACCATC ATTATTTTCA TGGTCTTCTG GTTAATAGGA GCTACCGTCT TTCACTTTTG TGAGGGCTGG TCGTATTTTA ATGGTGTATA CTTCTGCTTC TTATGTCTTA TTACTATTGG TTATGGTGAC TACGCACCGA AGACTCCTTT GGGTAGAGTT TTTTTTGTTT CATGGGCTGT TGCAGCAGTG CCCTTAATGA CTATCTTGAT TTCTAATGTT GGTGACAAGC TTTTCGGATT AGCCAATCAT TTAAGTTTTA TGGTTTCCAA AGCATTGTTT AGAGATGATG ACGAAGATGA TTATCATAAA AGGAGAAGGC AACTGGAAGA GGTTAGTGAT GACATAGAAA GAGAAGTAAA TATTGAAGAG GACGAAGAAG ATTACGAGTT AAGCTCTACT GGAAAGGATG TTGGGAGTAA TCACAAGGAT GATTTCTCAG CATTCATAAA TGGATCGCCA TTGGATTATT CACTTCATCA ACCTGACCAT CAACAAACAA TCCAATTGCA GCAGGTGCGT CAGAAAATCA CGACTAAGAT GCTTAATCAG AAAGAGACAT ATGAGAATAT TCTTTCTTTC TTGAACCAAC TAAAACCTTT GATTTCTGAT TCTGTAGAGA ATCCCCTTAA AAGATACAGT CACCTGGAGT GGTCTGAATT GTTGGACAGC TTGAATAAAG AGGATGTTAT CATAAAACAC CCAGATGGAA CTGAAACCGT CATAGCACCT ATTACTGTCA ATGCGGAGTA CAATTATTTC TGGCTAAGTG AACGATCTCC CCTTCGGTTA CCACTAAAAG AACCCAATTA TTTGATCATG AAAGTTTTCT TCAAAATCGA AAAAGATCTC AACGATCTTA TTGATGCCGA GGTCGAAGAT ATGGAACAGC TACGATCTGT AATGTCAAAT TCTTCTGTGC AAAATGTTGA AATGTTGAAC AGGACTCATC ACGAGAAGAA GGGTCATTTA TAA
|
Protein sequence | MDLGITQFRR HVKAAQRAVT PSREPTFSLN NYDDKLLPLL YHTPRNKVKQ KDVPMIVKNS LAMPITTVTS MKVRPGEPNF VYWYFVSSYF PLISACLGPL ANMISIISLV QHWRIEKATG KEVSDEPGLI VLNSMSLVFG ILANISLLMN FSGTIKYLIT QVVSIICFLG AVVVLMVDII ITNRDFIGQD PKYSRSEGFW FAVFTTFYYF CCAVTLLVNF LGYKLNKYPA TFNLDTKQRT LMIYTICFAI WSVFGSVVMA HMIDDLTYGS SLYYCIVSFL TIGLGDILPK TPGAKVMVLI LSLIGVLIMG LIVAMIRQVV MTSGGPTIFW NHIERDREKL LAKLKREHTP LTADQAFHKM RVIRRRAHVH QLNVSLASTI IIFMVFWLIG ATVFHFCEGW SYFNGVYFCF LCLITIGYGD YAPKTPLGRV FFVSWAVAAV PLMTILISNV GDKLFGLANH LSFMVSKALF RDDDEDDYHK RRRQSEEVSD DIEREVNIEE DEEDYELSST GKDVGSNHKD DFSAFINGSP LDYSLHQPDH QQTIQLQQVR QKITTKMLNQ KETYENILSF LNQLKPLISD SVENPLKRYS HSEWSELLDS LNKEDVIIKH PDGTETVIAP ITVNAEYNYF WLSERSPLRL PLKEPNYLIM KVFFKIEKDL NDLIDAEVED MEQLRSVMSN SSVQNVEMLN RTHHEKKGHL
|
| |