Gene PICST_31186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31186 
SymbolTOK1 
ID4839043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp151157 
End bp153259 
Gene Length2103 bp 
Protein Length700 aa 
Translation table12 
GC content40% 
IMG OID640390358 
Productoutward-rectifier potassium channel 
Protein accessionXP_001383990 
Protein GI150864960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000798921 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.515447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTAG GTATCACACA ATTCCGTCGA CATGTCAAAG CGGCCCAGAG GGCGGTGACT 
CCTTCCCGAG AGCCTACTTT TTCGCTAAAT AATTACGATG ACAAGCTTCT TCCATTGCTT
TATCATACAC CTAGAAATAA GGTCAAACAG AAGGACGTAC CGATGATAGT AAAAAACTCT
CTAGCTATGC CCATTACAAC CGTTACCAGC ATGAAGGTAC GACCGGGAGA ACCGAATTTT
GTATACTGGT ACTTTGTTTC GTCCTACTTC CCTCTTATAT CGGCTTGTTT GGGTCCGTTA
GCCAACATGA TATCCATTAT ATCCCTTGTT CAACATTGGA GAATAGAAAA GGCTACTGGA
AAAGAAGTGC TGGATGAACC TGGCCTAATT GTACTCAACT CGATGTCATT GGTATTCGGA
ATCCTCGCAA ATATTTCACT ATTAATGAAT TTCTCCGGAA CGATCAAATA CCTTATCACC
CAAGTTGTGT CCATAATCTG TTTTCTTGGT GCTGTAGTAG TGCTAATGGT GGATATAATC
ATTACCAACC GTGATTTCAT TGGTCAAGAC CCTAAATACT CTCGTTCCGA AGGGTTCTGG
TTCGCTGTAT TCACTACTTT TTACTACTTC TGCTGTGCTG TAACATTGCT TGTCAATTTC
TTGGGCTACA AGTTGAATAA ATATCCGGCC ACTTTTAATC TCGATACAAA GCAGAGAACT
TTAATGATAT ATACTATCTG CTTTGCTATA TGGAGCGTAT TTGGCTCCGT GGTTATGGCT
CATATGATTG ACGACTTGAC CTATGGCTCG TCTTTGTACT ACTGTATCGT CTCGTTTCTT
ACCATTGGCC TTGGTGACAT TCTTCCCAAG ACTCCTGGAG CTAAAGTCAT GGTGTTGATT
TTGTCCTTGA TCGGTGTATT GATCATGGGG TTGATCGTGG CCATGATTAG ACAGGTAGTG
ATGACCTCGG GAGGACCAAC AATCTTCTGG AATCACATAG AACGGGACCG TGAAAAGTTG
TTAGCAAAGC TCAAGAGAGA GCATACTCCC CTTACTGCCG ACCAAGCATT CCATAAAATG
AGGGTCATAC GAAGAAGGGC CCATGTTCAC CAATTGAATG TTTCTCTAGC ATCCACCATC
ATTATTTTCA TGGTCTTCTG GTTAATAGGA GCTACCGTCT TTCACTTTTG TGAGGGCTGG
TCGTATTTTA ATGGTGTATA CTTCTGCTTC TTATGTCTTA TTACTATTGG TTATGGTGAC
TACGCACCGA AGACTCCTTT GGGTAGAGTT TTTTTTGTTT CATGGGCTGT TGCAGCAGTG
CCCTTAATGA CTATCTTGAT TTCTAATGTT GGTGACAAGC TTTTCGGATT AGCCAATCAT
TTAAGTTTTA TGGTTTCCAA AGCATTGTTT AGAGATGATG ACGAAGATGA TTATCATAAA
AGGAGAAGGC AACTGGAAGA GGTTAGTGAT GACATAGAAA GAGAAGTAAA TATTGAAGAG
GACGAAGAAG ATTACGAGTT AAGCTCTACT GGAAAGGATG TTGGGAGTAA TCACAAGGAT
GATTTCTCAG CATTCATAAA TGGATCGCCA TTGGATTATT CACTTCATCA ACCTGACCAT
CAACAAACAA TCCAATTGCA GCAGGTGCGT CAGAAAATCA CGACTAAGAT GCTTAATCAG
AAAGAGACAT ATGAGAATAT TCTTTCTTTC TTGAACCAAC TAAAACCTTT GATTTCTGAT
TCTGTAGAGA ATCCCCTTAA AAGATACAGT CACCTGGAGT GGTCTGAATT GTTGGACAGC
TTGAATAAAG AGGATGTTAT CATAAAACAC CCAGATGGAA CTGAAACCGT CATAGCACCT
ATTACTGTCA ATGCGGAGTA CAATTATTTC TGGCTAAGTG AACGATCTCC CCTTCGGTTA
CCACTAAAAG AACCCAATTA TTTGATCATG AAAGTTTTCT TCAAAATCGA AAAAGATCTC
AACGATCTTA TTGATGCCGA GGTCGAAGAT ATGGAACAGC TACGATCTGT AATGTCAAAT
TCTTCTGTGC AAAATGTTGA AATGTTGAAC AGGACTCATC ACGAGAAGAA GGGTCATTTA
TAA
 
Protein sequence
MDLGITQFRR HVKAAQRAVT PSREPTFSLN NYDDKLLPLL YHTPRNKVKQ KDVPMIVKNS 
LAMPITTVTS MKVRPGEPNF VYWYFVSSYF PLISACLGPL ANMISIISLV QHWRIEKATG
KEVSDEPGLI VLNSMSLVFG ILANISLLMN FSGTIKYLIT QVVSIICFLG AVVVLMVDII
ITNRDFIGQD PKYSRSEGFW FAVFTTFYYF CCAVTLLVNF LGYKLNKYPA TFNLDTKQRT
LMIYTICFAI WSVFGSVVMA HMIDDLTYGS SLYYCIVSFL TIGLGDILPK TPGAKVMVLI
LSLIGVLIMG LIVAMIRQVV MTSGGPTIFW NHIERDREKL LAKLKREHTP LTADQAFHKM
RVIRRRAHVH QLNVSLASTI IIFMVFWLIG ATVFHFCEGW SYFNGVYFCF LCLITIGYGD
YAPKTPLGRV FFVSWAVAAV PLMTILISNV GDKLFGLANH LSFMVSKALF RDDDEDDYHK
RRRQSEEVSD DIEREVNIEE DEEDYELSST GKDVGSNHKD DFSAFINGSP LDYSLHQPDH
QQTIQLQQVR QKITTKMLNQ KETYENILSF LNQLKPLISD SVENPLKRYS HSEWSELLDS
LNKEDVIIKH PDGTETVIAP ITVNAEYNYF WLSERSPLRL PLKEPNYLIM KVFFKIEKDL
NDLIDAEVED MEQLRSVMSN SSVQNVEMLN RTHHEKKGHL