Gene PICST_22344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_22344 
Symbol 
ID4838431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1795822 
End bp1796343 
Gene Length522 bp 
Protein Length174 aa 
Translation table12 
GC content41% 
IMG OID640389746 
Productpredicted protein 
Protein accessionXP_001384297 
Protein GI126135546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTAGATT TGTATTTTTG TTGGCAACAC TCTTACTATA ACATTTTTGA CAAATCTCTC 
TTTTTAAGGG ATAAGGAGAG TGGCGGCCCC TTCTATTCGG ACTTTCTACT ATGTACAGTT
CTAGCACACG CGTCCCACAT ATCTGAAAGA AAACAACTTA GATCTGTTCC CAGTGATGCA
AGCACAGCAG GCGATCAGTT CTATAGATTT GCTTTAGAGA AGCTTCCCAA TGAACTTGAA
AATGCATCCA TTACTACAGT ACAAGGATTA TTGCTATTAG CCAGCAAGGA GTCTGGTGTT
GGAAGGAGAA GTTTGGGATG GATTCATTCG GGCATGGCAT TCCGAATTGC AATTGATTTG
GGCCTCCACC TAGATTGTTC AAGGCTAAGA ATAAATGGAC ACATAACAGA AGAGGAAAGT
AAAGTTAGAG ATTCGACATT TTGGGGCTGC TATATCTTTG ACCAGGGATG GAGTTTCTAT
CTTGGGCGTC CACCTGCTAT ACATGAATCC GATATAGATT TG
 
Protein sequence
LLDLYFCWQH SYYNIFDKSL FLRDKESGGP FYSDFLLCTV LAHASHISER KQLRSVPSDA 
STAGDQFYRF ALEKLPNELE NASITTVQGL LLLASKESGV GRRSLGWIHS GMAFRIAIDL
GLHLDCSRLR INGHITEEES KVRDSTFWGC YIFDQGWSFY LGRPPAIHES DIDL