Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_21863 |
Symbol | |
ID | 4838619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 954281 |
End bp | 954958 |
Gene Length | 678 bp |
Protein Length | 226 aa |
Translation table | 12 |
GC content | 48% |
IMG OID | 640389934 |
Product | predicted protein |
Protein accession | XP_001384489 |
Protein GI | 126135930 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.212893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0141714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GAACGTGACT ACAATCATGC CACCGATGGG GAGTACAAGA AGCTCCGTGC CAAAGCTGAC GACTTGTACA AGAAAAGGAA CCAACTCAGT CAACAGTCGC AACAGGCATA TAAAAGCGGC GACAAACAAA AGGCACACGA GTTGAGTGAG AAAGCAAAGC AGATTGTAGA TGAAGCTGAA GGCTATAATC GTCAAGCAGC GGAGTATGTG TTTCGGGAGA ATAACGCCGA CTCTGGCCCA GATGAAATCG ATCTTCACGG CTTATATGTC AAGGAAGCCG AGTATATCTT GCAGAACAGA ATAGCCAACG ACATCAGGAC CAATCAGTCG CACTTGAGAG TAATTGTAGG TAAAGGGTTA CATTCAGCCA ATGGTATAGC CAAGTTGAAA CCAGCCATCG ACCAGATGTG TGACGAGTGC AACTTAAAAC ATAAACTCGA TCCACATAAC TCAGGAGTCT TGGTTATCGA CTTGACCAAT ACCCAGTCTT CACAGGTTCC AAACCACTGG GGGCCAGTTT CGCAACCACA AGCTGCTTAC CATGGCTCTG GCCAGCCCCA GTACCAACAG CAACAACAAG GTGGACAGCC TGGTTACTAC CAGCAACAAG GAGGCCAGGG CCAGAACTCC GATGTGTCCA ACATCCTTGT CAAGATCCTC TGCTTCTGTG TCAAAAAC
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Protein sequence | ERDYNHATDG EYKKLRAKAD DLYKKRNQLS QQSQQAYKSG DKQKAHELSE KAKQIVDEAE GYNRQAAEYV FRENNADSGP DEIDLHGLYV KEAEYILQNR IANDIRTNQS HLRVIVGKGL HSANGIAKLK PAIDQMCDEC NLKHKLDPHN SGVLVIDLTN TQSSQVPNHW GPVSQPQAAY HGSGQPQYQQ QQQGGQPGYY QQQGGQGQNS DVSNILVKIL CFCVKN
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