Gene PICST_21863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_21863 
Symbol 
ID4838619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp954281 
End bp954958 
Gene Length678 bp 
Protein Length226 aa 
Translation table12 
GC content48% 
IMG OID640389934 
Productpredicted protein 
Protein accessionXP_001384489 
Protein GI126135930 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.212893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0141714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GAACGTGACT ACAATCATGC CACCGATGGG GAGTACAAGA AGCTCCGTGC CAAAGCTGAC 
GACTTGTACA AGAAAAGGAA CCAACTCAGT CAACAGTCGC AACAGGCATA TAAAAGCGGC
GACAAACAAA AGGCACACGA GTTGAGTGAG AAAGCAAAGC AGATTGTAGA TGAAGCTGAA
GGCTATAATC GTCAAGCAGC GGAGTATGTG TTTCGGGAGA ATAACGCCGA CTCTGGCCCA
GATGAAATCG ATCTTCACGG CTTATATGTC AAGGAAGCCG AGTATATCTT GCAGAACAGA
ATAGCCAACG ACATCAGGAC CAATCAGTCG CACTTGAGAG TAATTGTAGG TAAAGGGTTA
CATTCAGCCA ATGGTATAGC CAAGTTGAAA CCAGCCATCG ACCAGATGTG TGACGAGTGC
AACTTAAAAC ATAAACTCGA TCCACATAAC TCAGGAGTCT TGGTTATCGA CTTGACCAAT
ACCCAGTCTT CACAGGTTCC AAACCACTGG GGGCCAGTTT CGCAACCACA AGCTGCTTAC
CATGGCTCTG GCCAGCCCCA GTACCAACAG CAACAACAAG GTGGACAGCC TGGTTACTAC
CAGCAACAAG GAGGCCAGGG CCAGAACTCC GATGTGTCCA ACATCCTTGT CAAGATCCTC
TGCTTCTGTG TCAAAAAC
 
Protein sequence
ERDYNHATDG EYKKLRAKAD DLYKKRNQLS QQSQQAYKSG DKQKAHELSE KAKQIVDEAE 
GYNRQAAEYV FRENNADSGP DEIDLHGLYV KEAEYILQNR IANDIRTNQS HLRVIVGKGL
HSANGIAKLK PAIDQMCDEC NLKHKLDPHN SGVLVIDLTN TQSSQVPNHW GPVSQPQAAY
HGSGQPQYQQ QQQGGQPGYY QQQGGQGQNS DVSNILVKIL CFCVKN