Gene PICST_10596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_10596 
Symbol 
ID4838396 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp199360 
End bp201111 
Gene Length1752 bp 
Protein Length564 aa 
Translation table12 
GC content45% 
IMG OID640389711 
Productpredicted protein 
Protein accessionXP_001384339 
Protein GI126135630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GAAGATGGCA AAAAGAAGAA GGAGAAGGAG TCTAAATCAG ACAAGTTCTT CAGTTTTCTC 
ATGAAGTGTT TGGAAACAGC GGGAATAACC TTTAGTTCCA TTGCTATCCT AGGTGTTGCC
GGGATCGCTT ATCACAAGTT TTATGCTTCT CACGTATTGT CAAAAATGAA CGAAGCTTTC
GAAAATGGAG ATCCAGCTGC TCAGCTTGCT ATGCACAAAA AGACCCACGC CATCGCGGGG
GACTTGCCTG AAGATGCTTT CTGGGTCGAT AGACCGCAGC AGAAGTTGCT TGACGATATC
ATCTCCGGTA AGAAGGTAGG AAGTTACTAT TTAGTGGTAG GAGAAAAAGG TACCGGAAAG
ACATCTTTGA TCTTGGAAGC CATGAAAAAG GTCGGAGGAG AAAATGTAAC CGTCTTCGAT
GCCCACGCTG ATCCAGAGAT CTTCAGAATT CGTCTCGGTG CCTCTTTGAA CTTCACTTTC
AACGAAGACT ACATTGGTTC CTTGTTCTCG ATTAGAGGTC CTCGTGACAC TACAGCTTTA
CTTGATATAG AAAGAGCTTT CAGTAAGTTA GAAGAATTGG CAATGTTGAG AGTAGCCAAG
ATTCATCGCC CTTTGGTGAT GATCATCAAC AATGCCCATT TGATCAAGGA GAATGAAGAA
GGAATCAAGT TGTTAGAATT GCTTCAACAG AAGGCAGAGT CTCTCAGTGG TTCTGGTTTG
TTGACGATAA TCTTTAACAG TGACGACTAC TGGGTTTACG AAAAATTGAA AAAGCTTGGA
ACTAGGTTAG AAGTGGTGAA CGTGCGTGAT TTCAACAGAG CTGAGACTAT TTCTGCATTA
AAGTTCATTC GTCACAGATA CTTTCCTTTA CCTAAAGACC AGTTGACCAA CGAGCATTGC
CACCAGGTGT ATGATTTGAT TGGAGGAAGA CCTCAACACA TCACCCATGT TGCCAGACAT
GCCGATATAA TTAAGGCATG TCATGAGATC ATCGACAGAG AAAAGACATG GTTCCTCAAC
CAGTGTGGAT TGTTGGGTTC GGACATGGAC GACGATGTCA TGGAAGAAGG AAAGTTCTCT
GTCAGTGCCA TGTTGTTGAT GAAGGAGTTT GTCGATATGG ATCGTGAGCG CATGAACACC
TTGATCACCC ATAAAGTCAA ATCTGGCCAT GTGACCACCA AAAACCACGC TGACTATAGA
GACCACCACT TGCCAGAATT GCCTTTGTGG AGAAGCAGAC AGATTATGAC AAGGTCTGAC
TACATCCAGC AGTACGATAA CTTAAATATT TTTACGATTG ACTCTGATTC GCGAGTCAGG
GCAGACTCTG TGCCCATGAT GAGAGCATTT CACGAAATCT GCTCGCAGCC CAACTTCAAA
CAATTGCTTG ATGATAGCAT TCAACGTGTA GCTGATGTGG AGGCCTTGGA GAGAACAAGA
GAAATCGTGG CGAAGGACTT GAACTTGGGC AGTAACTACC AGTTGGTCAA GAAAGCTGCC
AAGCCATTGT CTCAGTTGGC TAGCTCTGTC CTAGTCGGAG AGGAGAGTAA AGACGAAGTT
GTATACGAAG TGGGCATAGT TAAGAGCCAG AAACATGTAG AGCTTCATGG AGAGTTCGGT
GACGGTATCG GTGATGACGA CGACGATATC GACGACGAAG ATGACGAGGA ATTGTACATG
GAAGATGTCG ACAGAAGAGC CACGAGAAAG TGGTGGAAGA GAAGAATGGC TGGTTTTGAC
ATGACGTACC TT
 
Protein sequence
EDGKKKKEKE SKSDKFFSFL MKCLETAGIT FSSIAILGVA GIAYHKFYAS HVLSKMNEAF 
ENGDPAAQLA MHKKTHAIAG DLPEDAFWVD RPQQKLLDDI ISGKKVGSYY LVVGEKGTGK
TSLILEAMKK VGGENVTVFD AHADPEIFRI RLGASLNFTF NEDYIGSLFS IRGPRDTTAL
LDIERAFSKL EELAMLRVAK IHRPLVMIIN NAHLIKENEE GIKLLELLQQ KAESLSGSGL
LTIIFNSDDY WVYEKLKKLG TRLEVVNVRD FNRAETISAL KFIRHRYFPL PKDQLTNEHC
HQVYDLIGGR PQHITHVARH ADIIKACHEI IDREKTWFLN QCGLLGSDMD DDVMEEGKFS
VSAMLLMKEF VDMDRERMNT LITHKVKSGH VTTKNHADYR DHHLPELPLW RSRQIMTRSD
YIQQYDNLNI FTIDSDSRVR ADSVPMMRAF HEICSQPNFK QLLDDSIQRV ADVEALERTR
EIVAKDLNLG SNYQLSKDEV VYEVGIVKSQ KHVELHGEFG DGIGDDDDDI DDEDDEELYM
EDVDRRATRK WWKRRMAGFD MTYL