Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_10596 |
Symbol | |
ID | 4838396 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 199360 |
End bp | 201111 |
Gene Length | 1752 bp |
Protein Length | 564 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640389711 |
Product | predicted protein |
Protein accession | XP_001384339 |
Protein GI | 126135630 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GAAGATGGCA AAAAGAAGAA GGAGAAGGAG TCTAAATCAG ACAAGTTCTT CAGTTTTCTC ATGAAGTGTT TGGAAACAGC GGGAATAACC TTTAGTTCCA TTGCTATCCT AGGTGTTGCC GGGATCGCTT ATCACAAGTT TTATGCTTCT CACGTATTGT CAAAAATGAA CGAAGCTTTC GAAAATGGAG ATCCAGCTGC TCAGCTTGCT ATGCACAAAA AGACCCACGC CATCGCGGGG GACTTGCCTG AAGATGCTTT CTGGGTCGAT AGACCGCAGC AGAAGTTGCT TGACGATATC ATCTCCGGTA AGAAGGTAGG AAGTTACTAT TTAGTGGTAG GAGAAAAAGG TACCGGAAAG ACATCTTTGA TCTTGGAAGC CATGAAAAAG GTCGGAGGAG AAAATGTAAC CGTCTTCGAT GCCCACGCTG ATCCAGAGAT CTTCAGAATT CGTCTCGGTG CCTCTTTGAA CTTCACTTTC AACGAAGACT ACATTGGTTC CTTGTTCTCG ATTAGAGGTC CTCGTGACAC TACAGCTTTA CTTGATATAG AAAGAGCTTT CAGTAAGTTA GAAGAATTGG CAATGTTGAG AGTAGCCAAG ATTCATCGCC CTTTGGTGAT GATCATCAAC AATGCCCATT TGATCAAGGA GAATGAAGAA GGAATCAAGT TGTTAGAATT GCTTCAACAG AAGGCAGAGT CTCTCAGTGG TTCTGGTTTG TTGACGATAA TCTTTAACAG TGACGACTAC TGGGTTTACG AAAAATTGAA AAAGCTTGGA ACTAGGTTAG AAGTGGTGAA CGTGCGTGAT TTCAACAGAG CTGAGACTAT TTCTGCATTA AAGTTCATTC GTCACAGATA CTTTCCTTTA CCTAAAGACC AGTTGACCAA CGAGCATTGC CACCAGGTGT ATGATTTGAT TGGAGGAAGA CCTCAACACA TCACCCATGT TGCCAGACAT GCCGATATAA TTAAGGCATG TCATGAGATC ATCGACAGAG AAAAGACATG GTTCCTCAAC CAGTGTGGAT TGTTGGGTTC GGACATGGAC GACGATGTCA TGGAAGAAGG AAAGTTCTCT GTCAGTGCCA TGTTGTTGAT GAAGGAGTTT GTCGATATGG ATCGTGAGCG CATGAACACC TTGATCACCC ATAAAGTCAA ATCTGGCCAT GTGACCACCA AAAACCACGC TGACTATAGA GACCACCACT TGCCAGAATT GCCTTTGTGG AGAAGCAGAC AGATTATGAC AAGGTCTGAC TACATCCAGC AGTACGATAA CTTAAATATT TTTACGATTG ACTCTGATTC GCGAGTCAGG GCAGACTCTG TGCCCATGAT GAGAGCATTT CACGAAATCT GCTCGCAGCC CAACTTCAAA CAATTGCTTG ATGATAGCAT TCAACGTGTA GCTGATGTGG AGGCCTTGGA GAGAACAAGA GAAATCGTGG CGAAGGACTT GAACTTGGGC AGTAACTACC AGTTGGTCAA GAAAGCTGCC AAGCCATTGT CTCAGTTGGC TAGCTCTGTC CTAGTCGGAG AGGAGAGTAA AGACGAAGTT GTATACGAAG TGGGCATAGT TAAGAGCCAG AAACATGTAG AGCTTCATGG AGAGTTCGGT GACGGTATCG GTGATGACGA CGACGATATC GACGACGAAG ATGACGAGGA ATTGTACATG GAAGATGTCG ACAGAAGAGC CACGAGAAAG TGGTGGAAGA GAAGAATGGC TGGTTTTGAC ATGACGTACC TT
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Protein sequence | EDGKKKKEKE SKSDKFFSFL MKCLETAGIT FSSIAILGVA GIAYHKFYAS HVLSKMNEAF ENGDPAAQLA MHKKTHAIAG DLPEDAFWVD RPQQKLLDDI ISGKKVGSYY LVVGEKGTGK TSLILEAMKK VGGENVTVFD AHADPEIFRI RLGASLNFTF NEDYIGSLFS IRGPRDTTAL LDIERAFSKL EELAMLRVAK IHRPLVMIIN NAHLIKENEE GIKLLELLQQ KAESLSGSGL LTIIFNSDDY WVYEKLKKLG TRLEVVNVRD FNRAETISAL KFIRHRYFPL PKDQLTNEHC HQVYDLIGGR PQHITHVARH ADIIKACHEI IDREKTWFLN QCGLLGSDMD DDVMEEGKFS VSAMLLMKEF VDMDRERMNT LITHKVKSGH VTTKNHADYR DHHLPELPLW RSRQIMTRSD YIQQYDNLNI FTIDSDSRVR ADSVPMMRAF HEICSQPNFK QLLDDSIQRV ADVEALERTR EIVAKDLNLG SNYQLSKDEV VYEVGIVKSQ KHVELHGEFG DGIGDDDDDI DDEDDEELYM EDVDRRATRK WWKRRMAGFD MTYL
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